Click here to switch to the map view.

The map label for this gene is 218884426

Identifier: 218884426

GI number: 218884426

Start: 1050374

End: 1050667

Strand: Reverse

Name: 218884426

Synonym: DKAM_1115

Alternate gene names: NA

Gene position: 1050667-1050374 (Counterclockwise)

Preceding gene: 218884427

Following gene: 218884425

Centisome position: 76.96

GC content: 48.3

Gene sequence:

>294_bases
ATGGGTGAGGAGATATATGATAAAGGCCTCAGGGAGAAGATCAAGCTGAGGATAGCCGGTAAAGTCGATGTACAGCTAGG
TAAGAATGGGGTAACCCAGGGATTCATTGAGGAGGTCAGGCTAAGGCTCCGGAAACACGGCGTGGTGAAGATAAAGGTGT
TGAAATCCTATAGGAGGAGCGAGGGCTTCGATATACATAGACTGGCTGAGGAGATAGCTGGTTTAACAGGTGGGAAAATA
TACGAGGTCAGGGGCTTCACTATCACGCTTATAAGGGGTGAAGGGGATGGTTAA

Upstream 100 bases:

>100_bases
GGAGGTGTCATATACCATTAATACCTGGTTTAACACTTAGTGTAAGAGTGAGGGGTAGTGGCAAGTCGTCCAGGTTGGTC
TATAGGTGTCTGCAATGTGG

Downstream 100 bases:

>100_bases
AAGTATTTTAAAGCATGTAGACTTAGTGATTACAATAGGGTGATTGAGTAAATGGTTACGGCATTAGAGGTTCCAGCTGA
CAAGCTAATTGAGAGGCTCG

Product: putative RNA-binding protein containing KH domain

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MGEEIYDKGLREKIKLRIAGKVDVQLGKNGVTQGFIEEVRLRLRKHGVVKIKVLKSYRRSEGFDIHRLAEEIAGLTGGKI
YEVRGFTITLIRGEGDG

Sequences:

>Translated_97_residues
MGEEIYDKGLREKIKLRIAGKVDVQLGKNGVTQGFIEEVRLRLRKHGVVKIKVLKSYRRSEGFDIHRLAEEIAGLTGGKI
YEVRGFTITLIRGEGDG
>Mature_96_residues
GEEIYDKGLREKIKLRIAGKVDVQLGKNGVTQGFIEEVRLRLRKHGVVKIKVLKSYRRSEGFDIHRLAEEIAGLTGGKIY
EVRGFTITLIRGEGDG

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10911; Mature: 10780

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEEIYDKGLREKIKLRIAGKVDVQLGKNGVTQGFIEEVRLRLRKHGVVKIKVLKSYRRS
CCCHHHHHHHHHEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCC
EGFDIHRLAEEIAGLTGGKIYEVRGFTITLIRGEGDG
CCCCHHHHHHHHCCCCCCEEEEECCEEEEEEEECCCC
>Mature Secondary Structure 
GEEIYDKGLREKIKLRIAGKVDVQLGKNGVTQGFIEEVRLRLRKHGVVKIKVLKSYRRS
CCHHHHHHHHHEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCC
EGFDIHRLAEEIAGLTGGKIYEVRGFTITLIRGEGDG
CCCCHHHHHHHHCCCCCCEEEEECCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA