| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884361
Identifier: 218884361
GI number: 218884361
Start: 996113
End: 997270
Strand: Reverse
Name: 218884361
Synonym: DKAM_1050
Alternate gene names: NA
Gene position: 997270-996113 (Counterclockwise)
Preceding gene: 218884365
Following gene: 218884352
Centisome position: 73.05
GC content: 45.51
Gene sequence:
>1158_bases GTGAACTGGAGGATAATCGGGTTAATATCCATAGTGGCATTAATAGTCTCGATAGCGCCATTAGCATCCATACCCATCAT TGCAAGCGGGGATCAGGAATCCCAGGATTCAGAGGTAGCCAGTGACATCATCGTTGGGAACAGCACGATGAATCTCACAG TGCCAGCTATATCCATCGATGATGCCTTAAACCTAGCATACATGATGAGGAATATAACGTATGAGCTGTTCATGTGGGAG GTAAACCATAATGTAAGCGTTGCTAACGTGACTCTTAACCTCGGTGATAAATTCCTTGATAAGGCCCTGGAGCTGAAGGA TAATGCAAGTAGGAGGGCAATAGTCTTCGCCGTAGTGGCCGCGATACACTATGGCCATGCTCCTTCATTCGCTAATCCAG TGCTGGCAAGGGTAATATACAGTAGCCTTGGCGAGAATAACACCGTGACAGACGAGACTGTAAACGCTGTGATAACTGCA TCAAGCGAGTTAAAATCCATACTGTTAAACGCGGTAAGCTACGCTGAGTCAAAGAATTTCAACACTACTTTTACATACTA CTGGGTCAGTAAGGGTGATAATCTAACCTCATTAGCACAGCAATACCTTGGAGAAGGCAATGTTACAGCAGCATTCAGGC ACGCCATAGCCGGGTACAAGGCTTATGTTAGGGCGTACTCTACACTAGTGAAGACCGTGTTCACCCAGTATCTTAGAGAC CTCGGGATAATCAGGGGGAAGCCATTCATCCCTCCAGGACTACTGGATAAGCTACCTCTGGAATTAAGAAGCGAGATAAA TGCTAGAGTAGAGAAGGGTGAGATTAAGAGCATAAGGGATATAGTGGGCGAGGTTAGAAAGGAGATACAGAATAGAACTG AGATGTGGAAGGAGAGAGAATACGTTCAGATAGCTAACATACTAGCTTCAGCACTAGAAAAGCTCAGTAAACACCCCGTA TTAACAAGGGTAATAATGGGGAAGCAGTTGAGGGATTACTGCTATGATCTAGTGAAAGAGGTAGCATCGAAGACCAATGC CACGGGACTACAACTACTCCAGCTGTCGCTGCAGGAGCTGCAGAACAGGGTTCAGGGAGGATTAAATATACAGCAGGAAT TCCAGGGCTCAGTAGTAAAGATCAGGATGAAACATTAG
Upstream 100 bases:
>100_bases AGTCCGATGGTTTCAAGCATATTGGAACAGTTTCCCCGATTGTTTCAGACGAGCCCTTATTTTTAACTATCGCTATATAC CCTCCTTGAGGTGGTGTAAT
Downstream 100 bases:
>100_bases TCTTCTAAGCCTACTCTACTTTTTTATTTTTTCGATAACATATTTTACAATGTAATCGGGCGGATTTACTCCTGTAGCGC TCCTCAACCCCTCCCATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISIDDALNLAYMMRNITYELFMWE VNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVAAIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITA SSELKSILLNAVSYAESKNFNTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKEREYVQIANILASALEKLSKHPV LTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQELQNRVQGGLNIQQEFQGSVVKIRMKH
Sequences:
>Translated_385_residues MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISIDDALNLAYMMRNITYELFMWE VNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVAAIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITA SSELKSILLNAVSYAESKNFNTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKEREYVQIANILASALEKLSKHPV LTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQELQNRVQGGLNIQQEFQGSVVKIRMKH >Mature_385_residues MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISIDDALNLAYMMRNITYELFMWE VNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVAAIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITA SSELKSILLNAVSYAESKNFNTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKEREYVQIANILASALEKLSKHPV LTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQELQNRVQGGLNIQQEFQGSVVKIRMKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42808; Mature: 42808
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISID CCEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEECCCEEEEEEEEEEHH DALNLAYMMRNITYELFMWEVNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVA HHHHHHHHHHHCEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHH AIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITASSELKSILLNAVSYAESKNF HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEECHHHHHHHHHHHHHHHHCCCC NTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD CCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKERE CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YVQIANILASALEKLSKHPVLTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QNRVQGGLNIQQEFQGSVVKIRMKH HHHHHCCCCCHHHHCCCEEEEEECC >Mature Secondary Structure MNWRIIGLISIVALIVSIAPLASIPIIASGDQESQDSEVASDIIVGNSTMNLTVPAISID CCEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEECCCEEEEEEEEEEHH DALNLAYMMRNITYELFMWEVNHNVSVANVTLNLGDKFLDKALELKDNASRRAIVFAVVA HHHHHHHHHHHCEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHH AIHYGHAPSFANPVLARVIYSSLGENNTVTDETVNAVITASSELKSILLNAVSYAESKNF HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHEECHHHHHHHHHHHHHHHHCCCC NTTFTYYWVSKGDNLTSLAQQYLGEGNVTAAFRHAIAGYKAYVRAYSTLVKTVFTQYLRD CCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIIRGKPFIPPGLLDKLPLELRSEINARVEKGEIKSIRDIVGEVRKEIQNRTEMWKERE CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YVQIANILASALEKLSKHPVLTRVIMGKQLRDYCYDLVKEVASKTNATGLQLLQLSLQEL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QNRVQGGLNIQQEFQGSVVKIRMKH HHHHHCCCCCHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA