Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884311

Identifier: 218884311

GI number: 218884311

Start: 946570

End: 946818

Strand: Reverse

Name: 218884311

Synonym: DKAM_1000

Alternate gene names: NA

Gene position: 946818-946570 (Counterclockwise)

Preceding gene: 218884312

Following gene: 218884297

Centisome position: 69.35

GC content: 35.74

Gene sequence:

>249_bases
ATGAGTGAATATATAAAGCAGTTAAAAATACAGATAGCAAGCAAAGTACCTGGTGTAAAATTCCAGGATAAATCAGCGTT
AGAGGTAATGATCTTAAGGGAAGGTAAAGCCGTCTTAACAATAAGGGATGAAAAAGACTATGTTGTATTAACAACATCCG
ATGGGAGCTCTTTTAAGTATGATAAATGGTATACCAAGCCGGAGCATCTTGCGGACACGGTAAAAGTATATATTGAGAGA
TTAAAGTAG

Upstream 100 bases:

>100_bases
ACCATATTCTTGATTAGAAAGGATTAGAAAAACGGAACCATTAACTTTTAAAGTCCATAATTAAATCCTTTAATTAGTAA
GCGTTTCCCAGGTGGTATAG

Downstream 100 bases:

>100_bases
TAGGTTTTTTTCAACCAGTTTAATCCTCAAAGGCTCGAAGTATCCCTCAAACTCGGAAACAATGCTTTTCTCACCAGTAA
TAACCAACTTATACCTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSEYIKQLKIQIASKVPGVKFQDKSALEVMILREGKAVLTIRDEKDYVVLTTSDGSSFKYDKWYTKPEHLADTVKVYIER
LK

Sequences:

>Translated_82_residues
MSEYIKQLKIQIASKVPGVKFQDKSALEVMILREGKAVLTIRDEKDYVVLTTSDGSSFKYDKWYTKPEHLADTVKVYIER
LK
>Mature_81_residues
SEYIKQLKIQIASKVPGVKFQDKSALEVMILREGKAVLTIRDEKDYVVLTTSDGSSFKYDKWYTKPEHLADTVKVYIERL
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9512; Mature: 9381

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYIKQLKIQIASKVPGVKFQDKSALEVMILREGKAVLTIRDEKDYVVLTTSDGSSFKY
CHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCC
DKWYTKPEHLADTVKVYIERLK
CCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEYIKQLKIQIASKVPGVKFQDKSALEVMILREGKAVLTIRDEKDYVVLTTSDGSSFKY
HHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCCCCC
DKWYTKPEHLADTVKVYIERLK
CCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA