Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884295

Identifier: 218884295

GI number: 218884295

Start: 933350

End: 934369

Strand: Reverse

Name: 218884295

Synonym: DKAM_0984

Alternate gene names: NA

Gene position: 934369-933350 (Counterclockwise)

Preceding gene: 218884296

Following gene: 218884294

Centisome position: 68.44

GC content: 47.16

Gene sequence:

>1020_bases
ATGTCTGAGAATATTAAGAGAGTATTTGTGGCGGGTGACTGGGACGCCGATGGTGTGGTTGCAGCCGCGCTCATCGTATA
TAGTCAAGAGAAGATCGGCAAATACCCCCTTGAATCCAAGGCTGTGGTCGACAAGGTACCTTTAGACCCGGATAAAGCCA
AGTATTTCCTGGCTAGTTTTAAAGGGGGATATGATTTAGCGGTCTTCCTGGACATACCATACAGCGAGTATCTTGGTAAC
GCTATGAAGATGATGAAGAATCACTTCGGAGTCTCTCAGATAGTATTCATAGATCACCATATAACAAGCCTGCAGAAGGC
CAGGGAACTCCAGGCGTTAGCCGATATCGTGGTGATCGATCATAAGATGCCCACGGCTGGGCTGGTCCTCTGGGAACTCG
AGAAGAAAGGCATCAGTGTCCACCAGAGATTAAGGAGTTTTGTCGAGGTAGTTAAATACATGGATATGGGGAAGAGGGTG
CCGGAGCAATACATGAAGTTATTCGAGTTAACCAAGATGTTCTCGAAGGCTTTAACCGTTATAAGAGATGAAACCCTATG
GGCTAAGATAGTCGAATGGCTTGCCACACCAGCTCCCCTACCAATGCCTCTTGATGAGGCGTTGTGGGGTAAGGTCAAGG
CAATTATAGAGGAGAGGGATAAGGAGGTGGCTGATAAGGCGATGGAACTAGCCGTTGGCGCTATTAAAGTAGGTGATTTC
CGCTTCATTGACGCGAGGAATGAGTGGAAGAAGAGAGGGGTTACCGCGCTTGCTTCAAAGCTTTCGACAATACTTAAGGC
ACCAGTACTACTACTAGCTGGGACCAATAGAGAGTACACCCTCCTAGTTATAAAGGCGTCTCATGGTAGGGCCTACAGGA
TAGCTAAGTATCTTGTTGGGGAGGGTGTAGCATTAGATATAGCCGGGCATCCCAACCTAGCTATAGTGAGATTACCGAAA
GACCTGGAGAAGCAAGAGCTGATTAAAATACTGTATCAAGCCGTATACTACTCCACATAA

Upstream 100 bases:

>100_bases
GAATTATGCAGGTATATAGGCGTATTAATGCCGGTAATTAAAGTTTTAATTATCATTAAATACTATCTAAGGCAATGACA
ACAGATTCGAGGTGCTTACC

Downstream 100 bases:

>100_bases
CCTGCAGGAACATGCCATGATCAAAATACTCGTCTCGAAAAACTCTATGCATATGCATGTATCGAGGGAGCATCACCCTG
AAAATCCTGAGAGAATAGTG

Product: phosphoesterase, RecJ domain-containing protein

Products: NA

Alternate protein names: Phosphoesterase RecJ Domain Protein; Phosphoesterase DHH Family

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSENIKRVFVAGDWDADGVVAAALIVYSQEKIGKYPLESKAVVDKVPLDPDKAKYFLASFKGGYDLAVFLDIPYSEYLGN
AMKMMKNHFGVSQIVFIDHHITSLQKARELQALADIVVIDHKMPTAGLVLWELEKKGISVHQRLRSFVEVVKYMDMGKRV
PEQYMKLFELTKMFSKALTVIRDETLWAKIVEWLATPAPLPMPLDEALWGKVKAIIEERDKEVADKAMELAVGAIKVGDF
RFIDARNEWKKRGVTALASKLSTILKAPVLLLAGTNREYTLLVIKASHGRAYRIAKYLVGEGVALDIAGHPNLAIVRLPK
DLEKQELIKILYQAVYYST

Sequences:

>Translated_339_residues
MSENIKRVFVAGDWDADGVVAAALIVYSQEKIGKYPLESKAVVDKVPLDPDKAKYFLASFKGGYDLAVFLDIPYSEYLGN
AMKMMKNHFGVSQIVFIDHHITSLQKARELQALADIVVIDHKMPTAGLVLWELEKKGISVHQRLRSFVEVVKYMDMGKRV
PEQYMKLFELTKMFSKALTVIRDETLWAKIVEWLATPAPLPMPLDEALWGKVKAIIEERDKEVADKAMELAVGAIKVGDF
RFIDARNEWKKRGVTALASKLSTILKAPVLLLAGTNREYTLLVIKASHGRAYRIAKYLVGEGVALDIAGHPNLAIVRLPK
DLEKQELIKILYQAVYYST
>Mature_338_residues
SENIKRVFVAGDWDADGVVAAALIVYSQEKIGKYPLESKAVVDKVPLDPDKAKYFLASFKGGYDLAVFLDIPYSEYLGNA
MKMMKNHFGVSQIVFIDHHITSLQKARELQALADIVVIDHKMPTAGLVLWELEKKGISVHQRLRSFVEVVKYMDMGKRVP
EQYMKLFELTKMFSKALTVIRDETLWAKIVEWLATPAPLPMPLDEALWGKVKAIIEERDKEVADKAMELAVGAIKVGDFR
FIDARNEWKKRGVTALASKLSTILKAPVLLLAGTNREYTLLVIKASHGRAYRIAKYLVGEGVALDIAGHPNLAIVRLPKD
LEKQELIKILYQAVYYST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38150; Mature: 38019

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENIKRVFVAGDWDADGVVAAALIVYSQEKIGKYPLESKAVVDKVPLDPDKAKYFLASF
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHC
KGGYDLAVFLDIPYSEYLGNAMKMMKNHFGVSQIVFIDHHITSLQKARELQALADIVVID
CCCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEE
HKMPTAGLVLWELEKKGISVHQRLRSFVEVVKYMDMGKRVPEQYMKLFELTKMFSKALTV
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IRDETLWAKIVEWLATPAPLPMPLDEALWGKVKAIIEERDKEVADKAMELAVGAIKVGDF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCE
RFIDARNEWKKRGVTALASKLSTILKAPVLLLAGTNREYTLLVIKASHGRAYRIAKYLVG
EEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHC
EGVALDIAGHPNLAIVRLPKDLEKQELIKILYQAVYYST
CCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SENIKRVFVAGDWDADGVVAAALIVYSQEKIGKYPLESKAVVDKVPLDPDKAKYFLASF
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHC
KGGYDLAVFLDIPYSEYLGNAMKMMKNHFGVSQIVFIDHHITSLQKARELQALADIVVID
CCCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEE
HKMPTAGLVLWELEKKGISVHQRLRSFVEVVKYMDMGKRVPEQYMKLFELTKMFSKALTV
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IRDETLWAKIVEWLATPAPLPMPLDEALWGKVKAIIEERDKEVADKAMELAVGAIKVGDF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCE
RFIDARNEWKKRGVTALASKLSTILKAPVLLLAGTNREYTLLVIKASHGRAYRIAKYLVG
EEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHC
EGVALDIAGHPNLAIVRLPKDLEKQELIKILYQAVYYST
CCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA