| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is ypwA [H]
Identifier: 218884269
GI number: 218884269
Start: 906422
End: 907915
Strand: Direct
Name: ypwA [H]
Synonym: DKAM_0958
Alternate gene names: 218884269
Gene position: 906422-907915 (Clockwise)
Preceding gene: 218884255
Following gene: 218884278
Centisome position: 66.39
GC content: 47.39
Gene sequence:
>1494_bases ATGTACTTCCAAAACGAGGTCGTGAAGGAGATAATTGAAAGGTATAGGCAGATATGGTCCATCGGTCATGCATTATCTCT AATGGGCTGGGATAGCGAGACCTATATGCCTAAGGCAGGAGTGGAAGAGAGGGCCATTGCCAGAGCCGAGCTCAGCCTTC TTGCCCAGCAGTTAATACTCAAACCCGAGTTTGTACAGCTCGTCGATAAAGCGAGTGGCTTAGAGGGGTTGAATGATTAT GAGAAGGGTGTTGTTCGAGTACTCCAGCGTGAGATAAGGATTATGAAGGCGATACCTCCAAGACTCTTAGCTGAACTAGA GAAGACGACTCAGGAGGCGATGCATGCCTGGAGGATGGCTAAAGAAGCAAACGACTATGAGAAGTTCAAGCCCTACCTAG ATAAAATAATCAAGCTCACGAGAGAGAAAGCGGATTACTTGGGCTGGAAGGAGCACCCATACGATGCTCTGCTGGATTTA TACGAGGAGGGTTTGACCACGCGAGACGTGGATGGAATTTTAGAGCCCCTGGCTAAAGAGCTGAAAGCCTTGCTGAGTAG TGTCGTGCATGAGGGCAGATTCCCTCAGAAACACCCATTGGAAGACGAACGGTATGAGAGAGAGTGGATGGAGCGGGTCA ATTTAGAGGTCCTGAAGATTGTGGGCTTTCCTATTGGTGAGAGGTCTAGGCTTGATGTCTCAGCACACCCCTTCACAATA TCCATCGGCTTAGACGATGTCAGAATTACAACGAGGTATGAAGGGTTCGACTTCAAGAGGAGCCTGTTGAGCACTATACA TGAGTTTGGCCATGCTCTCTACGAGTTGCAGATCGATCCAGGCTTGAAATACACTCCCCTAGCCGAAGGCGCGAGCTTAG GCGTTCATGAGGGGCAGAGCCGTTTCTGGGAGAATGTAATCGGTAGGAGCCGTGAATTCGTAGAGCTCATATATCCTATA TTAAGAAAGAATCTCCCGTCGGTAGGCAGATTCACGCCTGAGGAAGTCTACTTATACTTCAATACTGTTAGACCAAGCCT CATACGTACAGAGGCTGATGAAGTCACATACAACCTCCACATAGTATTGAGAGCCAGGCTTGAGAAGCTGATGATCGAAG GCTCAGTTAAAGCCGGTGACCTGCCTGAACTATGGAACAGCCTGATGGAGGAGCTGGTTGGCGTTAAACCTAAGACTTAC AGTGAAGGAGTTCTACAGGATATTCACTGGAGTATGGGCTCGATAGGCTACTTCCCAACATACACTCTAGGAAACATTAT AGCAGCCCAGCTTAGGTACCATATTGAGAGAAAACTGAAATTATCCGAGAAGATCTCTCGGGGAGAATTCGAGTCTATAA GAGAATGGTTGAAAAATATGATTCACAGGTACGGTAGGACATACCCACCTAAAGAGCTTCTCAGAATGGTCTTCGGGGAG GAATACTCGGTGGAACCACTAGTGAAATATTTGAAAGAGAAATACGTGGGGTAA
Upstream 100 bases:
>100_bases GCAACAGGCTGGAATCCGATTATTCCTTCCTTACTCTATATTTTTGTTTAAGGATTAAGAATATAAGTTGAGGCACGTTT AAGATAATGTGGTTATGGCT
Downstream 100 bases:
>100_bases TCTCTTAAAGTTTAAAGTTTTTCTACGCAGAATACTCAAAGCTGGATGAAATTTAGGGATTGAATCCTGTTAAGGCTAAG TTGAGCTAAGCTTGCCATCG
Product: peptidase M32, carboxypeptidase Taq metallopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLILKPEFVQLVDKASGLEGLNDY EKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMAKEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDL YEEGLTTRDVDGILEPLAKELKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQSRFWENVIGRSREFVELIYPI LRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLHIVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTY SEGVLQDIHWSMGSIGYFPTYTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE EYSVEPLVKYLKEKYVG
Sequences:
>Translated_497_residues MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLILKPEFVQLVDKASGLEGLNDY EKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMAKEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDL YEEGLTTRDVDGILEPLAKELKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQSRFWENVIGRSREFVELIYPI LRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLHIVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTY SEGVLQDIHWSMGSIGYFPTYTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE EYSVEPLVKYLKEKYVG >Mature_497_residues MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLILKPEFVQLVDKASGLEGLNDY EKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMAKEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDL YEEGLTTRDVDGILEPLAKELKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQSRFWENVIGRSREFVELIYPI LRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLHIVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTY SEGVLQDIHWSMGSIGYFPTYTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE EYSVEPLVKYLKEKYVG
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 57872; Mature: 57872
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00639 THIOL_PROTEASE_HIS ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KPEFVQLVDKASGLEGLNDYEKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMA CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDLYEEGLTTRDVDGILEPLAKE HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH LKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCEEE SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQS EECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHHH RFWENVIGRSREFVELIYPILRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLH HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCHHHHCCHHHHEEEHH IVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTYSEGVLQDIHWSMGSIGYFPT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCH YTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC EYSVEPLVKYLKEKYVG CCCHHHHHHHHHHHCCC >Mature Secondary Structure MYFQNEVVKEIIERYRQIWSIGHALSLMGWDSETYMPKAGVEERAIARAELSLLAQQLIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KPEFVQLVDKASGLEGLNDYEKGVVRVLQREIRIMKAIPPRLLAELEKTTQEAMHAWRMA CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KEANDYEKFKPYLDKIIKLTREKADYLGWKEHPYDALLDLYEEGLTTRDVDGILEPLAKE HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH LKALLSSVVHEGRFPQKHPLEDERYEREWMERVNLEVLKIVGFPIGERSRLDVSAHPFTI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCEEE SIGLDDVRITTRYEGFDFKRSLLSTIHEFGHALYELQIDPGLKYTPLAEGASLGVHEGQS EECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHHH RFWENVIGRSREFVELIYPILRKNLPSVGRFTPEEVYLYFNTVRPSLIRTEADEVTYNLH HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCHHHHCCHHHHEEEHH IVLRARLEKLMIEGSVKAGDLPELWNSLMEELVGVKPKTYSEGVLQDIHWSMGSIGYFPT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCH YTLGNIIAAQLRYHIERKLKLSEKISRGEFESIREWLKNMIHRYGRTYPPKELLRMVFGE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC EYSVEPLVKYLKEKYVG CCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]