| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884259
Identifier: 218884259
GI number: 218884259
Start: 898415
End: 898828
Strand: Reverse
Name: 218884259
Synonym: DKAM_0948
Alternate gene names: NA
Gene position: 898828-898415 (Counterclockwise)
Preceding gene: 218884260
Following gene: 218884258
Centisome position: 65.84
GC content: 39.61
Gene sequence:
>414_bases GTGAGCCTTGAAACATATATATGGTACTACATGGTGGCTGTAATAGTGTTAACAATATCTTATTCTCTATACGGTATTGT GACGAGGAGCCATATAGTTAAGAAAATGATCTTCATTACGATACTTTCAGACGCTGTCTACGTCTTACTAGTCTTCATGG GATACAGGATTAATGCATCCATGCCTCCAGTATATCCAGGTGGAACACTGTTGAACCCTAATCTACCTGGGTCCCCTGGT GATATAGAGTCATTTATCAGTAGATCTGTTGATCCAGTGCCTCAGGTTCTTATAGTTACAGGTATAGTAATAGGTCTAGC TCAGCTCATTTTTCTCTCTTCCATATCATTGAAAATCGCTAAGGCTACTGGCACGCTTAATATTAAGCGTTTAGAGGTGG AGGAGAATGAATAA
Upstream 100 bases:
>100_bases GTGTACTATTCTGGCTTAACCTATTTGAGTTCCTAGCTGTTTCAACCGGTTTCACTCTAGCATTAATGTATTTAACCAAG GTCTTCGAGGGTGATGCTGT
Downstream 100 bases:
>100_bases GTCATCTATTCTGTTGGCTTTATTACTTAGTATAGTAGTCTACCTGGTCTATACAGGGGTATTCGATGTTGTCGAGTTAA CATTAGCCATTGTAATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NADH-Ubiquinone Oxidoreductase Subunit 4L; Multisubunit Na+/H+ Antiporter MnhC Subunit; Membrane Bound Hydrogenase MbhG Subunit; Membrane Bound Complex 2 Subunit C; Na(+) H(+) Antiporter Subunit C; Membrane Bound Protein Complex Subunit MbxG; Integral Membrane Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSLETYIWYYMVAVIVLTISYSLYGIVTRSHIVKKMIFITILSDAVYVLLVFMGYRINASMPPVYPGGTLLNPNLPGSPG DIESFISRSVDPVPQVLIVTGIVIGLAQLIFLSSISLKIAKATGTLNIKRLEVEENE
Sequences:
>Translated_137_residues MSLETYIWYYMVAVIVLTISYSLYGIVTRSHIVKKMIFITILSDAVYVLLVFMGYRINASMPPVYPGGTLLNPNLPGSPG DIESFISRSVDPVPQVLIVTGIVIGLAQLIFLSSISLKIAKATGTLNIKRLEVEENE >Mature_136_residues SLETYIWYYMVAVIVLTISYSLYGIVTRSHIVKKMIFITILSDAVYVLLVFMGYRINASMPPVYPGGTLLNPNLPGSPGD IESFISRSVDPVPQVLIVTGIVIGLAQLIFLSSISLKIAKATGTLNIKRLEVEENE
Specific function: Unknown
COG id: COG1006
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15096; Mature: 14965
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLETYIWYYMVAVIVLTISYSLYGIVTRSHIVKKMIFITILSDAVYVLLVFMGYRINAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MPPVYPGGTLLNPNLPGSPGDIESFISRSVDPVPQVLIVTGIVIGLAQLIFLSSISLKIA CCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE KATGTLNIKRLEVEENE ECCCCEEEEEEEECCCC >Mature Secondary Structure SLETYIWYYMVAVIVLTISYSLYGIVTRSHIVKKMIFITILSDAVYVLLVFMGYRINAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MPPVYPGGTLLNPNLPGSPGDIESFISRSVDPVPQVLIVTGIVIGLAQLIFLSSISLKIA CCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE KATGTLNIKRLEVEENE ECCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA