| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884260
Identifier: 218884260
GI number: 218884260
Start: 898825
End: 899616
Strand: Reverse
Name: 218884260
Synonym: DKAM_0949
Alternate gene names: NA
Gene position: 899616-898825 (Counterclockwise)
Preceding gene: 218884261
Following gene: 218884259
Centisome position: 65.9
GC content: 46.34
Gene sequence:
>792_bases ATGAGGAATAACTATGCATCCATAATAATACCTGTTATTCTATCTATATTGGTAATAGTGGTATTAGTGTATACAGGGCT CGCCAGCTATGATGCACAGATTCTAACCGGGTTGGCCCAGATATATCTAGGTAACGTAGTGTATCCAGGCTCACCGTGGA CCTCTATTAGCACCGAAGTGGTAACTAGTGTTATATGGGATCAGAGAGGCTTCGACACGTATTTTGAGACAAGCGTATTA TTCCTGGCAATAGTGAGCTCTATGCTTGTTTTGGAGAAAACCAGTATACGTGGGGGAACCTCGGCAAAGGAGATGACCAT TATAGTGAGGACCGTGTCAATGTTTGTCGTGCTAATCATAGTGGCGGTCAGTGTATCGATAGCACTGCATGGTCATTTAA CGCCTGGCGGAGGCTTCCAGGGCGGCAGCATCTTCGTCATTGCACCGCTTGTAATGCTATTAGTCTTTGGAAGCAGTGTA CTCGAGGAGAAGGGATTCACCAATCGTAAGCTACTTGGAGTTAGGTCTCTAGCGGTGTCACTTATATTTCTGCTTGGCCT GGTCCCGGTCATCTATAGTTTACTGGGCTCCGTAAACGCGTATCTCTTCCAGAACCTCTATAAGCCGGGATCGCTGTTCA GCTTCCCCGCGGCAATACAAACCCCGTTCGGACAGGTACTTCTATCCGGTGTACTATTCTGGCTTAACCTATTTGAGTTC CTAGCTGTTTCAACCGGTTTCACTCTAGCATTAATGTATTTAACCAAGGTCTTCGAGGGTGATGCTGTGTGA
Upstream 100 bases:
>100_bases TCATACTTCCTTGCACCGGATCTCCTTATAGCATACATCGCCATAGGGCTTGGAGTAAACAGTGTACTGTTTGTATATGT GTTAAGCAAGGGTGAGAGAT
Downstream 100 bases:
>100_bases GCCTTGAAACATATATATGGTACTACATGGTGGCTGTAATAGTGTTAACAATATCTTATTCTCTATACGGTATTGTGACG AGGAGCCATATAGTTAAGAA
Product: Na+/H+ antiporter MnhB subunit-like protein
Products: NA
Alternate protein names: Na+/H+ Antiporter MnhB Subunit-Like Protein; Multisubunit Na+/H+ Antiporter MnhB Subunit; Na+/H+ Antiporter Family Domain Protein; Na+/H+ Antiporter MnhB Subunit; Membrane Bound Complex 1 Subunit D
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MRNNYASIIIPVILSILVIVVLVYTGLASYDAQILTGLAQIYLGNVVYPGSPWTSISTEVVTSVIWDQRGFDTYFETSVL FLAIVSSMLVLEKTSIRGGTSAKEMTIIVRTVSMFVVLIIVAVSVSIALHGHLTPGGGFQGGSIFVIAPLVMLLVFGSSV LEEKGFTNRKLLGVRSLAVSLIFLLGLVPVIYSLLGSVNAYLFQNLYKPGSLFSFPAAIQTPFGQVLLSGVLFWLNLFEF LAVSTGFTLALMYLTKVFEGDAV
Sequences:
>Translated_263_residues MRNNYASIIIPVILSILVIVVLVYTGLASYDAQILTGLAQIYLGNVVYPGSPWTSISTEVVTSVIWDQRGFDTYFETSVL FLAIVSSMLVLEKTSIRGGTSAKEMTIIVRTVSMFVVLIIVAVSVSIALHGHLTPGGGFQGGSIFVIAPLVMLLVFGSSV LEEKGFTNRKLLGVRSLAVSLIFLLGLVPVIYSLLGSVNAYLFQNLYKPGSLFSFPAAIQTPFGQVLLSGVLFWLNLFEF LAVSTGFTLALMYLTKVFEGDAV >Mature_263_residues MRNNYASIIIPVILSILVIVVLVYTGLASYDAQILTGLAQIYLGNVVYPGSPWTSISTEVVTSVIWDQRGFDTYFETSVL FLAIVSSMLVLEKTSIRGGTSAKEMTIIVRTVSMFVVLIIVAVSVSIALHGHLTPGGGFQGGSIFVIAPLVMLLVFGSSV LEEKGFTNRKLLGVRSLAVSLIFLLGLVPVIYSLLGSVNAYLFQNLYKPGSLFSFPAAIQTPFGQVLLSGVLFWLNLFEF LAVSTGFTLALMYLTKVFEGDAV
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28394; Mature: 28394
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNNYASIIIPVILSILVIVVLVYTGLASYDAQILTGLAQIYLGNVVYPGSPWTSISTEV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHH VTSVIWDQRGFDTYFETSVLFLAIVSSMLVLEKTSIRGGTSAKEMTIIVRTVSMFVVLII HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VAVSVSIALHGHLTPGGGFQGGSIFVIAPLVMLLVFGSSVLEEKGFTNRKLLGVRSLAVS HHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LIFLLGLVPVIYSLLGSVNAYLFQNLYKPGSLFSFPAAIQTPFGQVLLSGVLFWLNLFEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHH LAVSTGFTLALMYLTKVFEGDAV HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRNNYASIIIPVILSILVIVVLVYTGLASYDAQILTGLAQIYLGNVVYPGSPWTSISTEV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHH VTSVIWDQRGFDTYFETSVLFLAIVSSMLVLEKTSIRGGTSAKEMTIIVRTVSMFVVLII HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VAVSVSIALHGHLTPGGGFQGGSIFVIAPLVMLLVFGSSVLEEKGFTNRKLLGVRSLAVS HHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LIFLLGLVPVIYSLLGSVNAYLFQNLYKPGSLFSFPAAIQTPFGQVLLSGVLFWLNLFEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHH LAVSTGFTLALMYLTKVFEGDAV HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA