| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884258
Identifier: 218884258
GI number: 218884258
Start: 897922
End: 898422
Strand: Reverse
Name: 218884258
Synonym: DKAM_0947
Alternate gene names: NA
Gene position: 898422-897922 (Counterclockwise)
Preceding gene: 218884259
Following gene: 218884257
Centisome position: 65.81
GC content: 42.12
Gene sequence:
>501_bases ATGAATAAGTCATCTATTCTGTTGGCTTTATTACTTAGTATAGTAGTCTACCTGGTCTATACAGGGGTATTCGATGTTGT CGAGTTAACATTAGCCATTGTAATCGGCTTGGTTGTTGCATATATATTCAAGATGGAACTCACCACCGGGTTGAGAGGAG TATCTATTAGAAGAATCATGCTTGGAGTATACTACTTGATCAAATACTTCACCATCATAGAGGCCAAGGCACACTGGAGT GTAGTAAAGGTCATCCTCTCCAGGAACATTGATGTACAGCCAGCAATAGTTAGAGTTCCATATAGGGTATCAAGTGATTA TGGCGTGGTCTTTATAGCGAACAGTATAACCAATACCCCTGGAACAGTAGTCGTTGACCTGGATCAAGAGAAGAAGGTCT ACTATGTACACTGGTTGACACCCACAGATATAAGCGATGAGGGTGCTTATAGGGAGGTCTCCTCTGAGTTCGAGAAATAC CTCAGCAGGATATTCGGGTGA
Upstream 100 bases:
>100_bases GTAATAGGTCTAGCTCAGCTCATTTTTCTCTCTTCCATATCATTGAAAATCGCTAAGGCTACTGGCACGCTTAATATTAA GCGTTTAGAGGTGGAGGAGA
Downstream 100 bases:
>100_bases GGTGGTCCAGGTGGATATACAGGCATTCCTACTACTCATACTGCTTCAAACAGTTTTTACGAGTTTCATAGTATATATGG TATTTTATGTCTTCTTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Cation Antiporter; Na(+) H(+) Antiporter Subunit E; Membrane Bound Hydrogenase MbhA Subunit; Membrane Bound Protein Complex Subunit MbxA; Integral Membrane Protein; Membrane Bound Hydrogenase MbxA Subunit; Na(+)/H(+) Antiporter Subunit E; Membrane Bound Hydrogenase Subunit MbhA; Multisubunit Na+/H+ Antiporter Mnhe Subunit; Membrane Bound Complex 1 Subunit B; Membrane-Bound NADP+-Reducing Complex MBX Subunit MbxA; Multisubunit Na+/H+ Antiporter MnhE Subunit
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIMLGVYYLIKYFTIIEAKAHWS VVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTPGTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKY LSRIFG
Sequences:
>Translated_166_residues MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIMLGVYYLIKYFTIIEAKAHWS VVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTPGTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKY LSRIFG >Mature_166_residues MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIMLGVYYLIKYFTIIEAKAHWS VVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTPGTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKY LSRIFG
Specific function: Unknown
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18764; Mature: 18764
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGVYYLIKYFTIIEAKAHWSVVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEECCCCCEEEEECCCCCCC GTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKYLSRIFG CEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGVYYLIKYFTIIEAKAHWSVVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEECCCCCEEEEECCCCCCC GTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKYLSRIFG CEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA