Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884258

Identifier: 218884258

GI number: 218884258

Start: 897922

End: 898422

Strand: Reverse

Name: 218884258

Synonym: DKAM_0947

Alternate gene names: NA

Gene position: 898422-897922 (Counterclockwise)

Preceding gene: 218884259

Following gene: 218884257

Centisome position: 65.81

GC content: 42.12

Gene sequence:

>501_bases
ATGAATAAGTCATCTATTCTGTTGGCTTTATTACTTAGTATAGTAGTCTACCTGGTCTATACAGGGGTATTCGATGTTGT
CGAGTTAACATTAGCCATTGTAATCGGCTTGGTTGTTGCATATATATTCAAGATGGAACTCACCACCGGGTTGAGAGGAG
TATCTATTAGAAGAATCATGCTTGGAGTATACTACTTGATCAAATACTTCACCATCATAGAGGCCAAGGCACACTGGAGT
GTAGTAAAGGTCATCCTCTCCAGGAACATTGATGTACAGCCAGCAATAGTTAGAGTTCCATATAGGGTATCAAGTGATTA
TGGCGTGGTCTTTATAGCGAACAGTATAACCAATACCCCTGGAACAGTAGTCGTTGACCTGGATCAAGAGAAGAAGGTCT
ACTATGTACACTGGTTGACACCCACAGATATAAGCGATGAGGGTGCTTATAGGGAGGTCTCCTCTGAGTTCGAGAAATAC
CTCAGCAGGATATTCGGGTGA

Upstream 100 bases:

>100_bases
GTAATAGGTCTAGCTCAGCTCATTTTTCTCTCTTCCATATCATTGAAAATCGCTAAGGCTACTGGCACGCTTAATATTAA
GCGTTTAGAGGTGGAGGAGA

Downstream 100 bases:

>100_bases
GGTGGTCCAGGTGGATATACAGGCATTCCTACTACTCATACTGCTTCAAACAGTTTTTACGAGTTTCATAGTATATATGG
TATTTTATGTCTTCTTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Cation Antiporter; Na(+) H(+) Antiporter Subunit E; Membrane Bound Hydrogenase MbhA Subunit; Membrane Bound Protein Complex Subunit MbxA; Integral Membrane Protein; Membrane Bound Hydrogenase MbxA Subunit; Na(+)/H(+) Antiporter Subunit E; Membrane Bound Hydrogenase Subunit MbhA; Multisubunit Na+/H+ Antiporter Mnhe Subunit; Membrane Bound Complex 1 Subunit B; Membrane-Bound NADP+-Reducing Complex MBX Subunit MbxA; Multisubunit Na+/H+ Antiporter MnhE Subunit

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIMLGVYYLIKYFTIIEAKAHWS
VVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTPGTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKY
LSRIFG

Sequences:

>Translated_166_residues
MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIMLGVYYLIKYFTIIEAKAHWS
VVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTPGTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKY
LSRIFG
>Mature_166_residues
MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIMLGVYYLIKYFTIIEAKAHWS
VVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTPGTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKY
LSRIFG

Specific function: Unknown

COG id: COG1863

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18764; Mature: 18764

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGVYYLIKYFTIIEAKAHWSVVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEECCCCCEEEEECCCCCCC
GTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKYLSRIFG
CEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKSSILLALLLSIVVYLVYTGVFDVVELTLAIVIGLVVAYIFKMELTTGLRGVSIRRIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LGVYYLIKYFTIIEAKAHWSVVKVILSRNIDVQPAIVRVPYRVSSDYGVVFIANSITNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEECCCCCEEEEECCCCCCC
GTVVVDLDQEKKVYYVHWLTPTDISDEGAYREVSSEFEKYLSRIFG
CEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA