| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884172
Identifier: 218884172
GI number: 218884172
Start: 827157
End: 828152
Strand: Direct
Name: 218884172
Synonym: DKAM_0861
Alternate gene names: NA
Gene position: 827157-828152 (Clockwise)
Preceding gene: 218884169
Following gene: 218884175
Centisome position: 60.59
GC content: 44.78
Gene sequence:
>996_bases ATGATATATGTGGGCATAGATATGCAGGTTGAGAGAAAACTTGGCGGGGGCTTAATTATCACCCTGATAGTAGTAACCCT CGTGATCCTAGCTTACAGTGTTATCACATCCTCCCTTAGCTCGCTACTGGAACTATACTCCATGGATACCCCTGTCTCAC TACTGGTAATAACGCTTGGATGGATTATATCGGCTCTCAGGTTGAAATTACTCTTTGAATCAAGTATGAAGGGGATTACT CTTCCATTAATTGACAGCCTGGCTATTAGGCTCATAGGCGGTTTAACCGCGAATATAACGCCCTCCTCGATAGGCGGTGA GCCTGGCAGAGCATATTACTTGTCCAGAAGGACAGGAGTCGATACTGTTAAATCCTATGCACTAGTGATCTACGAGGTTT ACTATGATGTATTAGCCGTAAACATTATTGGTGCCTTCCTCAGCGTTAAATATCTGCCTCTAAGCACACCTGTCTTACTA GTATCGTTATTCATGTCCTTCTCATGGCTCTCCATATCGCTTAAAATAGTGAGGGCTGGCAGGAACATGCCTAGCGGACC CGATGCAGCACCAAGGTGGATACCTGGATTTATGAGGAAACACTTCAACAAGCTGTATGCAATGTACCTTGATTTCGCCT CTAGCTATAGCGAGATGGCTTCAAGGATATCCCTAGGGAAGAAGGCTTTACTATGGCTGCTGACAATACTCTACCACACA ATATGGGGTATCGCGGCACTCCCATTCATCCACGTGTTTAATGTTGACGCCGTGGTTAAAGTTGTCGAGGCCTATTTCAT CATGCAGTCATTTAGCTCCCTGCCTACGCCTGGTGGAAGTGGTGCAGCTGAATATGGATTATCAATAGTCTTAGATCCCT CGATTGTCGTGAAGTATAGGGTTGTGTACTATTACTATGGAATCGTGGCTGGGCTGATATCGCTGATAATATATGATAAC AAGCTTAGGAGGTGGGTAAGCTGGGTTTTACATTAA
Upstream 100 bases:
>100_bases ATGGATTCTATTTGGTCTTCACTATAGCTAAAGGCTCATCCCTTTTACACCGGGATAACATGGTATATATTTTGGGGTTT AAATATATCTAGGTAAACCC
Downstream 100 bases:
>100_bases AACATTAAACAAACTCTAAGTGGCTTTTGTAGCTGTTCTAACAGCTTTCTTAGGACGTAGCGTGCCCTTGGATCTACATC TCCTGCACTTGGTAGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIYVGIDMQVERKLGGGLIITLIVVTLVILAYSVITSSLSSLLELYSMDTPVSLLVITLGWIISALRLKLLFESSMKGIT LPLIDSLAIRLIGGLTANITPSSIGGEPGRAYYLSRRTGVDTVKSYALVIYEVYYDVLAVNIIGAFLSVKYLPLSTPVLL VSLFMSFSWLSISLKIVRAGRNMPSGPDAAPRWIPGFMRKHFNKLYAMYLDFASSYSEMASRISLGKKALLWLLTILYHT IWGIAALPFIHVFNVDAVVKVVEAYFIMQSFSSLPTPGGSGAAEYGLSIVLDPSIVVKYRVVYYYYGIVAGLISLIIYDN KLRRWVSWVLH
Sequences:
>Translated_331_residues MIYVGIDMQVERKLGGGLIITLIVVTLVILAYSVITSSLSSLLELYSMDTPVSLLVITLGWIISALRLKLLFESSMKGIT LPLIDSLAIRLIGGLTANITPSSIGGEPGRAYYLSRRTGVDTVKSYALVIYEVYYDVLAVNIIGAFLSVKYLPLSTPVLL VSLFMSFSWLSISLKIVRAGRNMPSGPDAAPRWIPGFMRKHFNKLYAMYLDFASSYSEMASRISLGKKALLWLLTILYHT IWGIAALPFIHVFNVDAVVKVVEAYFIMQSFSSLPTPGGSGAAEYGLSIVLDPSIVVKYRVVYYYYGIVAGLISLIIYDN KLRRWVSWVLH >Mature_331_residues MIYVGIDMQVERKLGGGLIITLIVVTLVILAYSVITSSLSSLLELYSMDTPVSLLVITLGWIISALRLKLLFESSMKGIT LPLIDSLAIRLIGGLTANITPSSIGGEPGRAYYLSRRTGVDTVKSYALVIYEVYYDVLAVNIIGAFLSVKYLPLSTPVLL VSLFMSFSWLSISLKIVRAGRNMPSGPDAAPRWIPGFMRKHFNKLYAMYLDFASSYSEMASRISLGKKALLWLLTILYHT IWGIAALPFIHVFNVDAVVKVVEAYFIMQSFSSLPTPGGSGAAEYGLSIVLDPSIVVKYRVVYYYYGIVAGLISLIIYDN KLRRWVSWVLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36663; Mature: 36663
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYVGIDMQVERKLGGGLIITLIVVTLVILAYSVITSSLSSLLELYSMDTPVSLLVITLG CEEEECCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WIISALRLKLLFESSMKGITLPLIDSLAIRLIGGLTANITPSSIGGEPGRAYYLSRRTGV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCH DTVKSYALVIYEVYYDVLAVNIIGAFLSVKYLPLSTPVLLVSLFMSFSWLSISLKIVRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECC RNMPSGPDAAPRWIPGFMRKHFNKLYAMYLDFASSYSEMASRISLGKKALLWLLTILYHT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWGIAALPFIHVFNVDAVVKVVEAYFIMQSFSSLPTPGGSGAAEYGLSIVLDPSIVVKYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCHHHHHHH VVYYYYGIVAGLISLIIYDNKLRRWVSWVLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIYVGIDMQVERKLGGGLIITLIVVTLVILAYSVITSSLSSLLELYSMDTPVSLLVITLG CEEEECCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WIISALRLKLLFESSMKGITLPLIDSLAIRLIGGLTANITPSSIGGEPGRAYYLSRRTGV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCH DTVKSYALVIYEVYYDVLAVNIIGAFLSVKYLPLSTPVLLVSLFMSFSWLSISLKIVRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECC RNMPSGPDAAPRWIPGFMRKHFNKLYAMYLDFASSYSEMASRISLGKKALLWLLTILYHT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWGIAALPFIHVFNVDAVVKVVEAYFIMQSFSSLPTPGGSGAAEYGLSIVLDPSIVVKYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCHHHHHHH VVYYYYGIVAGLISLIIYDNKLRRWVSWVLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA