Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883764

Identifier: 218883764

GI number: 218883764

Start: 423159

End: 423851

Strand: Reverse

Name: 218883764

Synonym: DKAM_0453

Alternate gene names: NA

Gene position: 423851-423159 (Counterclockwise)

Preceding gene: 218883766

Following gene: 218883763

Centisome position: 31.05

GC content: 45.45

Gene sequence:

>693_bases
ATGTATTTCTACAACTTGTTTAAGAGGCGTGATCATGCTACGGTTGTAACCGTGGTTTTCCACACCATGAGATCCAGCGA
TATTAAACGAGCCGCTGGATTGCTCAGCAAGTTAAGGAGGAGAGTTAGTGTTCTCGATGCATACATCGTTTACTATGGTG
AAAGAACAGGTGTAGCCTCAAGTATACCGCTTCACTATCCTGAGGAGTTATATAGTAGGGGCTCGGCCCTATATGATGGT
AGTAGGCTTGCATCATCCTCGCTTGTAGTCTTCATCAACGCTGGCTCCAAATGCTTCACACCGGATAGTGTAGTCGATGC
TGTTGACTCCATCTTAATGGGTGAGGCAATCATATATATGTCTGCCCCCTCAGGTAGCCAAGGCCTCTTCACAGGGTTTA
AATCGATTACAAGAGAGCTTGGCGGAGAATCCACACGACTTGGCTTGATGGCATCACCTGCTTACTCTATAGTTGTTACA
CTAGCTAAGTACGTGAAGAGGTATTCCTTCTGGTCCATAGAACCTTTCATCGCGCTTAATGCTACGAACACTAGTGGAAA
AGCTATAAGAGTTAATAATGAATGCGTAGATTTAGTTGACCTAGGCTGGCTGGAGCCGCTTATAATAACTGATCTAAGGA
GCAGGCTTGTAAGGTATCTTCAACCGGTCAGCGACATGGGTGATGGATCGTGA

Upstream 100 bases:

>100_bases
ACCCCACGAAGACCTAGAGCGTAGGTGGGAAACGGTTTAAAGCATTATTTTTAAAGTCACAGAGATCCTAGTATATTTCA
GCTAAGGGTGTTTCACTTCC

Downstream 100 bases:

>100_bases
GGATAGCACTAGTTACAACTGCAAGGTTTAGCAGACTTGCACTAGAGTTACTGAGAAATATTAAGACTCCTACAGCCCTC
CATGTGTTCAGCATGGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MYFYNLFKRRDHATVVTVVFHTMRSSDIKRAAGLLSKLRRRVSVLDAYIVYYGERTGVASSIPLHYPEELYSRGSALYDG
SRLASSSLVVFINAGSKCFTPDSVVDAVDSILMGEAIIYMSAPSGSQGLFTGFKSITRELGGESTRLGLMASPAYSIVVT
LAKYVKRYSFWSIEPFIALNATNTSGKAIRVNNECVDLVDLGWLEPLIITDLRSRLVRYLQPVSDMGDGS

Sequences:

>Translated_230_residues
MYFYNLFKRRDHATVVTVVFHTMRSSDIKRAAGLLSKLRRRVSVLDAYIVYYGERTGVASSIPLHYPEELYSRGSALYDG
SRLASSSLVVFINAGSKCFTPDSVVDAVDSILMGEAIIYMSAPSGSQGLFTGFKSITRELGGESTRLGLMASPAYSIVVT
LAKYVKRYSFWSIEPFIALNATNTSGKAIRVNNECVDLVDLGWLEPLIITDLRSRLVRYLQPVSDMGDGS
>Mature_230_residues
MYFYNLFKRRDHATVVTVVFHTMRSSDIKRAAGLLSKLRRRVSVLDAYIVYYGERTGVASSIPLHYPEELYSRGSALYDG
SRLASSSLVVFINAGSKCFTPDSVVDAVDSILMGEAIIYMSAPSGSQGLFTGFKSITRELGGESTRLGLMASPAYSIVVT
LAKYVKRYSFWSIEPFIALNATNTSGKAIRVNNECVDLVDLGWLEPLIITDLRSRLVRYLQPVSDMGDGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25394; Mature: 25394

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFYNLFKRRDHATVVTVVFHTMRSSDIKRAAGLLSKLRRRVSVLDAYIVYYGERTGVAS
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
SIPLHYPEELYSRGSALYDGSRLASSSLVVFINAGSKCFTPDSVVDAVDSILMGEAIIYM
CCCCCCCHHHHHCCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEE
SAPSGSQGLFTGFKSITRELGGESTRLGLMASPAYSIVVTLAKYVKRYSFWSIEPFIALN
ECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEE
ATNTSGKAIRVNNECVDLVDLGWLEPLIITDLRSRLVRYLQPVSDMGDGS
CCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYFYNLFKRRDHATVVTVVFHTMRSSDIKRAAGLLSKLRRRVSVLDAYIVYYGERTGVAS
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
SIPLHYPEELYSRGSALYDGSRLASSSLVVFINAGSKCFTPDSVVDAVDSILMGEAIIYM
CCCCCCCHHHHHCCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEE
SAPSGSQGLFTGFKSITRELGGESTRLGLMASPAYSIVVTLAKYVKRYSFWSIEPFIALN
ECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEE
ATNTSGKAIRVNNECVDLVDLGWLEPLIITDLRSRLVRYLQPVSDMGDGS
CCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA