| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883763
Identifier: 218883763
GI number: 218883763
Start: 422431
End: 423162
Strand: Reverse
Name: 218883763
Synonym: DKAM_0452
Alternate gene names: NA
Gene position: 423162-422431 (Counterclockwise)
Preceding gene: 218883764
Following gene: 218883762
Centisome position: 31.0
GC content: 46.17
Gene sequence:
>732_bases GTGAGGATAGCACTAGTTACAACTGCAAGGTTTAGCAGACTTGCACTAGAGTTACTGAGAAATATTAAGACTCCTACAGC CCTCCATGTGTTCAGCATGGATCCGGAGGTTGAAGCTGTTGCCAGGGAGGTTAAGGCCACCTTCAACAAGTTCAATAGCA TAGAGGAATTATACATGTACAGGGAGCTGGAGTCCTGTGATATAGGTGTCATTGCGTTGGATAGAGATAGCGATAGCATA GCTGTAACCAGGATCCTTGGAAAGATGGGGGTGCCATTGGTTTTCATAGTGTTGAATACCCGAGGCAACATGGAGCTCGC TAGGGGCGAGGGGGCTGAATACGTCATAAGCCTGGACGAATACGTAGTAGGTAATATCCTCCCTATAATACTAATGGATT CATGGGTTTCAATGAGGATCATTGATGCTTTTAACCTTGGCGTAGCTGTTTACAGGGTGTGGAAAAGAGGGGTGCTGGGT GTTAAGCTCGGCGACTTCCTCGATAAATTAAAGGGGAAGCCAGCCATGCTAATGGTGTATGATAAAGCCGGTCGAATAGT GATGAATGAAGATCACGTGCTCGAGCAAGGCGACGCATTGATACTCATCGCTAAATACAGTGAGCTACTGGAGTACATTA GCTCTATAGAAAAGATCTTCTCGAAGTATGAGGAATATGTTGCCAGAAGATACTCAGAGCAGTTCCCCACTATGCCTAGG ACCATGGGGTGA
Upstream 100 bases:
>100_bases ATTTAGTTGACCTAGGCTGGCTGGAGCCGCTTATAATAACTGATCTAAGGAGCAGGCTTGTAAGGTATCTTCAACCGGTC AGCGACATGGGTGATGGATC
Downstream 100 bases:
>100_bases TGGACGTGAACTACATTATAGATGTTATACTAAAGGGCCTCGAGATGATGGCACCGAGGATCATAGCTTCAATAATAGTG CTACTTGCATCCTGGCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRIALVTTARFSRLALELLRNIKTPTALHVFSMDPEVEAVAREVKATFNKFNSIEELYMYRELESCDIGVIALDRDSDSI AVTRILGKMGVPLVFIVLNTRGNMELARGEGAEYVISLDEYVVGNILPIILMDSWVSMRIIDAFNLGVAVYRVWKRGVLG VKLGDFLDKLKGKPAMLMVYDKAGRIVMNEDHVLEQGDALILIAKYSELLEYISSIEKIFSKYEEYVARRYSEQFPTMPR TMG
Sequences:
>Translated_243_residues MRIALVTTARFSRLALELLRNIKTPTALHVFSMDPEVEAVAREVKATFNKFNSIEELYMYRELESCDIGVIALDRDSDSI AVTRILGKMGVPLVFIVLNTRGNMELARGEGAEYVISLDEYVVGNILPIILMDSWVSMRIIDAFNLGVAVYRVWKRGVLG VKLGDFLDKLKGKPAMLMVYDKAGRIVMNEDHVLEQGDALILIAKYSELLEYISSIEKIFSKYEEYVARRYSEQFPTMPR TMG >Mature_243_residues MRIALVTTARFSRLALELLRNIKTPTALHVFSMDPEVEAVAREVKATFNKFNSIEELYMYRELESCDIGVIALDRDSDSI AVTRILGKMGVPLVFIVLNTRGNMELARGEGAEYVISLDEYVVGNILPIILMDSWVSMRIIDAFNLGVAVYRVWKRGVLG VKLGDFLDKLKGKPAMLMVYDKAGRIVMNEDHVLEQGDALILIAKYSELLEYISSIEKIFSKYEEYVARRYSEQFPTMPR TMG
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27574; Mature: 27574
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALVTTARFSRLALELLRNIKTPTALHVFSMDPEVEAVAREVKATFNKFNSIEELYMY CEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RELESCDIGVIALDRDSDSIAVTRILGKMGVPLVFIVLNTRGNMELARGEGAEYVISLDE HHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEHHH YVVGNILPIILMDSWVSMRIIDAFNLGVAVYRVWKRGVLGVKLGDFLDKLKGKPAMLMVY HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEE DKAGRIVMNEDHVLEQGDALILIAKYSELLEYISSIEKIFSKYEEYVARRYSEQFPTMPR ECCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TMG CCC >Mature Secondary Structure MRIALVTTARFSRLALELLRNIKTPTALHVFSMDPEVEAVAREVKATFNKFNSIEELYMY CEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH RELESCDIGVIALDRDSDSIAVTRILGKMGVPLVFIVLNTRGNMELARGEGAEYVISLDE HHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEHHH YVVGNILPIILMDSWVSMRIIDAFNLGVAVYRVWKRGVLGVKLGDFLDKLKGKPAMLMVY HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEE DKAGRIVMNEDHVLEQGDALILIAKYSELLEYISSIEKIFSKYEEYVARRYSEQFPTMPR ECCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TMG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA