Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883550

Identifier: 218883550

GI number: 218883550

Start: 222301

End: 222786

Strand: Direct

Name: 218883550

Synonym: DKAM_0239

Alternate gene names: NA

Gene position: 222301-222786 (Clockwise)

Preceding gene: 218883549

Following gene: 218883551

Centisome position: 16.28

GC content: 42.8

Gene sequence:

>486_bases
ATGAGGATTAGTCCCGTGTTCATAACGAGGTCGTTAATTATAGCGTCCGTCTATACTGCTGTAACCCTGATGCTTGGATA
CATATCGTATGGTGAACTACAGTTTAGGGTGAGCGATGCAATGATAATATTGCCGTTGATAGTTGGCTTGGGTTTAGACG
CGGTTGTTGGCTTAACCATAGGTGGGTTGCTTGGAAATTTAGCGAGTCCATTCATACCATGGGACTGGGTCTTTGGACCA
CTGGCTAATCTAGTCGCTTCAACTATTGTTTACCTAGTTGGGAGAACCAGGCTGAACACTTATGTAAAGCTTGCTGTATC
CTCGATACTTGCCTCTCTAGCTATTGCTGTGATAGTGGGATACGAGTTAACAGTGATATATGGGCTTCCAGAGCTAACTA
TACTCTATATTTTCATAAGCGAGCTAGTCATTATAGGCGTCATAGGTGGATTAGTATATAGGTCTCTCAGGGTGTTTTTT
AAGTGA

Upstream 100 bases:

>100_bases
GGGGAGGTTCTTATCCTTGTTGCACCAGGGATAGAATCATGGTTTAAAAAGCAGTGGTTAGTTATTTATATAATCCTTGA
AAATCCGGTACGGTGATTTC

Downstream 100 bases:

>100_bases
ACGAGGTGAGAGGTGTAGATTTATCAATAGGTTATTCGCCGGGTAAACCGTTAATAGAGGATGCAGAGTTCACTCTAGGC
CCTGGGCTCCACGTATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTIGGLLGNLASPFIPWDWVFGP
LANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVGYELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFF
K

Sequences:

>Translated_161_residues
MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTIGGLLGNLASPFIPWDWVFGP
LANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVGYELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFF
K
>Mature_161_residues
MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTIGGLLGNLASPFIPWDWVFGP
LANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVGYELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFF
K

Specific function: Unknown

COG id: COG4708

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17441; Mature: 17441

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCHHHHHHHHH
GGLLGNLASPFIPWDWVFGPLANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFFK
HHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRISPVFITRSLIIASVYTAVTLMLGYISYGELQFRVSDAMIILPLIVGLGLDAVVGLTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCHHHHHHHHH
GGLLGNLASPFIPWDWVFGPLANLVASTIVYLVGRTRLNTYVKLAVSSILASLAIAVIVG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YELTVIYGLPELTILYIFISELVIIGVIGGLVYRSLRVFFK
HHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA