Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883540

Identifier: 218883540

GI number: 218883540

Start: 212088

End: 212462

Strand: Direct

Name: 218883540

Synonym: DKAM_0229

Alternate gene names: NA

Gene position: 212088-212462 (Clockwise)

Preceding gene: 218883538

Following gene: 218883542

Centisome position: 15.54

GC content: 41.33

Gene sequence:

>375_bases
GTGAACTATATGAGCGATGAGCTACCTGATTCATTAAGGCTGAAGCTCTACAAGAAGTATGTTTCAGCAATCACTAGGAA
GAGCAGTGAGGTGGATAAAACACGGGTTGAAAAACCCGAGGATGTGGTGTGGAGTAAATTAACGGATGAAAAAGCGAGGG
AGCTCATGAATAAGCTTAAAGCACTCTACCCCGATATTTACCAGGTACTCGTTGGAGAGCTATATAAGTTATTGAAGGAC
GGGGTTTTAAAGGAGCTGGATGGTTTAACCGCGTATAGTATTATAAAGGCTCTAGGACTGAATATACGCCCGGATATAAG
GATAAAGTTTGTTAAGGATGGTAAGGAAGTAGATCTCGATGAATACATGAAGTAG

Upstream 100 bases:

>100_bases
ACACCTTTACTCTTTAACCCCTCGTTTGTAGTGGTATAGCACTTCAATTCAACCACCTATCGGGTTATAAGTTGTAATAA
TTTATAATATTATTAATGAG

Downstream 100 bases:

>100_bases
AGTATTTTAGAAGAGTAGGGAGGATAGGAAAAAGAGAGCCTTTAACCAAAACTACAGGGAGCTATTTAACACCGTACATC
GTTAATGCTAATACAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNYMSDELPDSLRLKLYKKYVSAITRKSSEVDKTRVEKPEDVVWSKLTDEKARELMNKLKALYPDIYQVLVGELYKLLKD
GVLKELDGLTAYSIIKALGLNIRPDIRIKFVKDGKEVDLDEYMK

Sequences:

>Translated_124_residues
MNYMSDELPDSLRLKLYKKYVSAITRKSSEVDKTRVEKPEDVVWSKLTDEKARELMNKLKALYPDIYQVLVGELYKLLKD
GVLKELDGLTAYSIIKALGLNIRPDIRIKFVKDGKEVDLDEYMK
>Mature_124_residues
MNYMSDELPDSLRLKLYKKYVSAITRKSSEVDKTRVEKPEDVVWSKLTDEKARELMNKLKALYPDIYQVLVGELYKLLKD
GVLKELDGLTAYSIIKALGLNIRPDIRIKFVKDGKEVDLDEYMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14432; Mature: 14432

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYMSDELPDSLRLKLYKKYVSAITRKSSEVDKTRVEKPEDVVWSKLTDEKARELMNKLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ALYPDIYQVLVGELYKLLKDGVLKELDGLTAYSIIKALGLNIRPDIRIKFVKDGKEVDLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH
EYMK
HHCC
>Mature Secondary Structure
MNYMSDELPDSLRLKLYKKYVSAITRKSSEVDKTRVEKPEDVVWSKLTDEKARELMNKLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ALYPDIYQVLVGELYKLLKDGVLKELDGLTAYSIIKALGLNIRPDIRIKFVKDGKEVDLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH
EYMK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA