| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883538
Identifier: 218883538
GI number: 218883538
Start: 210147
End: 211109
Strand: Direct
Name: 218883538
Synonym: DKAM_0227
Alternate gene names: NA
Gene position: 210147-211109 (Clockwise)
Preceding gene: 218883537
Following gene: 218883540
Centisome position: 15.39
GC content: 45.28
Gene sequence:
>963_bases TTGCAAGCCTCAATCCTAGAGGATTTTTCAAGGGCTCTCTCACTATCCTTAATACTTGAAGCTTCTGCATGGCCTAAGCC AGGCAACGTACATAGGCTTAGGGATAGACCTGATCTAAGGTACGAGGCGTTCCTGGCTACAGGGGTTATGGCCTACAGTT ATTTCAGGAGGGGTATTAAACGAGGCTTGAATGGATGGCGTAGCATAGTGCTTGGTGATCTGATCTATGGATTAGTCTCT GACTCCATGAGGAAAACCCCTTCATCCAATACATGCCTTGGCTCCAGTACGCTCTTAATCCCCCTCAGTCTTGGTCTAGG ACGCTGTATTGCAAAGGGGATCCCTGGATTAGAGTGTGTGATAGAGGGGGCCATGGAGGCGCTTAACGGGGCTGGTGTGT GGGACACTATATATTACTATAGAGCCGTGAGAACGGCCTCACCAAGCTATCTTAAGCCAAGCGATGACACGGGGGAATAT GTAAACATATGGGATCCGCATTACGCTAGGAAACTAGCTGAGAAAAATACTCGGCTAATAGACGTCTTAAAGTATAGTTC TAGAATAGATGTGGTGGCCGATGAGCTGGTTAACGGATATAAACGCTCCATCGCTTCGGAGAGATTTCTTAGAGAGCGAT TCAACCTGCATGGTGACTGGAATAGAAGCGTTGTTGAGACATACCTGTACATCCTCATGGAAAACAATGATACAATAGTG TTGTTAAAGCATGGGGCTGGAATGGTAGAATATGTGAAAAAGAGGGCGGAGGATGTTCTCTTAATGGTTCTCAAGGATAA TAGTAGCGAGTGGGTAAAACCTGTCATGCTTCTCGATGAGGAATTATACAGGCTTAAAGTAAATCCAGGTGCCATAGCCG ATCTCACAGTATCCTCGATAGCTTTATTCCTGTTGAAGAATATTATCCAGGGTGATGCTTTTCTAAAACCTAGTACCGTT TAA
Upstream 100 bases:
>100_bases GGCCTTATTAATGCTTGACAGAGTTCTTGCGGAGAGGAAATGATGTATTTAAACAGGGTTGAAAGATTGGGAAGCCTTGG AGTGGGAAAGGGGAAAGTAT
Downstream 100 bases:
>100_bases ACCTCTCCTCTAGATCAACCCTTCCCCGTGGATGATACCCAAGTGCTTCCCAGTATCCATCCCTGTACTCCTCGCTAAGG ATTATCCTTGAAACCCATTT
Product: triphosphoribosyl-dephospho-CoA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MQASILEDFSRALSLSLILEASAWPKPGNVHRLRDRPDLRYEAFLATGVMAYSYFRRGIKRGLNGWRSIVLGDLIYGLVS DSMRKTPSSNTCLGSSTLLIPLSLGLGRCIAKGIPGLECVIEGAMEALNGAGVWDTIYYYRAVRTASPSYLKPSDDTGEY VNIWDPHYARKLAEKNTRLIDVLKYSSRIDVVADELVNGYKRSIASERFLRERFNLHGDWNRSVVETYLYILMENNDTIV LLKHGAGMVEYVKKRAEDVLLMVLKDNSSEWVKPVMLLDEELYRLKVNPGAIADLTVSSIALFLLKNIIQGDAFLKPSTV
Sequences:
>Translated_320_residues MQASILEDFSRALSLSLILEASAWPKPGNVHRLRDRPDLRYEAFLATGVMAYSYFRRGIKRGLNGWRSIVLGDLIYGLVS DSMRKTPSSNTCLGSSTLLIPLSLGLGRCIAKGIPGLECVIEGAMEALNGAGVWDTIYYYRAVRTASPSYLKPSDDTGEY VNIWDPHYARKLAEKNTRLIDVLKYSSRIDVVADELVNGYKRSIASERFLRERFNLHGDWNRSVVETYLYILMENNDTIV LLKHGAGMVEYVKKRAEDVLLMVLKDNSSEWVKPVMLLDEELYRLKVNPGAIADLTVSSIALFLLKNIIQGDAFLKPSTV >Mature_320_residues MQASILEDFSRALSLSLILEASAWPKPGNVHRLRDRPDLRYEAFLATGVMAYSYFRRGIKRGLNGWRSIVLGDLIYGLVS DSMRKTPSSNTCLGSSTLLIPLSLGLGRCIAKGIPGLECVIEGAMEALNGAGVWDTIYYYRAVRTASPSYLKPSDDTGEY VNIWDPHYARKLAEKNTRLIDVLKYSSRIDVVADELVNGYKRSIASERFLRERFNLHGDWNRSVVETYLYILMENNDTIV LLKHGAGMVEYVKKRAEDVLLMVLKDNSSEWVKPVMLLDEELYRLKVNPGAIADLTVSSIALFLLKNIIQGDAFLKPSTV
Specific function: Unknown
COG id: COG1767
COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002736 [H]
Pfam domain/function: PF01874 CitG [H]
EC number: NA
Molecular weight: Translated: 35948; Mature: 35948
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASILEDFSRALSLSLILEASAWPKPGNVHRLRDRPDLRYEAFLATGVMAYSYFRRGIK CCCHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH RGLNGWRSIVLGDLIYGLVSDSMRKTPSSNTCLGSSTLLIPLSLGLGRCIAKGIPGLECV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHH IEGAMEALNGAGVWDTIYYYRAVRTASPSYLKPSDDTGEYVNIWDPHYARKLAEKNTRLI HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCHHH DVLKYSSRIDVVADELVNGYKRSIASERFLRERFNLHGDWNRSVVETYLYILMENNDTIV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCEEE LLKHGAGMVEYVKKRAEDVLLMVLKDNSSEWVKPVMLLDEELYRLKVNPGAIADLTVSSI EEECCCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH ALFLLKNIIQGDAFLKPSTV HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQASILEDFSRALSLSLILEASAWPKPGNVHRLRDRPDLRYEAFLATGVMAYSYFRRGIK CCCHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH RGLNGWRSIVLGDLIYGLVSDSMRKTPSSNTCLGSSTLLIPLSLGLGRCIAKGIPGLECV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHH IEGAMEALNGAGVWDTIYYYRAVRTASPSYLKPSDDTGEYVNIWDPHYARKLAEKNTRLI HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCHHH DVLKYSSRIDVVADELVNGYKRSIASERFLRERFNLHGDWNRSVVETYLYILMENNDTIV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCEEE LLKHGAGMVEYVKKRAEDVLLMVLKDNSSEWVKPVMLLDEELYRLKVNPGAIADLTVSSI EEECCCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH ALFLLKNIIQGDAFLKPSTV HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]