Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883530

Identifier: 218883530

GI number: 218883530

Start: 203914

End: 204822

Strand: Direct

Name: 218883530

Synonym: DKAM_0219

Alternate gene names: NA

Gene position: 203914-204822 (Clockwise)

Preceding gene: 218883521

Following gene: 218883534

Centisome position: 14.94

GC content: 43.45

Gene sequence:

>909_bases
ATGAAGCCGCAGACGGAGTGTTTAAGGTGTATTTTGACAACGAGGCTTAGAGAGATAGAGTATTCATCGTTAAGTCCAGG
AGAGAAGATAGTACTAGCTAAGAGGATAATGAGCAAACTAGTGAACGACTTCTCCCTTGATTCAACTGAGCTAACAAGGC
TTGCATCGGACTTGTTTCAGCTAACGGTAACAGCGCCGGGCGTCCTCGACTACTATAGGTTAGTGAAGACCCAAAGTATG
AGAAGGGCTCTCGCGTTGAGAGATGCCCATAGGGAGCATGCAAGATACTTAGACGACTACAGGAGGTTACGTTACCTATT
GAAGGTCTCAGCCCTCGGAAACCTTATAGACTATGGTGTCATGGATCATAACTTCAATGAAGAAATAGACCCAGGTATCG
CTGAGAACGTGGAGATAGCAATAGATGATAGTGTTAAATTCTATGAACTAGTGAGAAAAGGCGGGCTCAAGATAATGTTC
CTGCTGGATAACGCTGGGGAAGCAGTCTACGATTCACTACTCGTAGAGTATCTCCGTGGAAAAGGTAACACTACTATAGG
AGTAGTTAAGGATGAGCCAGGCTTTCAAAACGATGTAACACTTAACGATTTCATAGAGATCGGCCTGGACAAGGTGTTCG
ATAAGATTGTAACACCAGGTTGCAGAAGCATATGTTCATCCATACACCTCGATAAGGTGAGCGAGGACTTTAAATCACTA
TTGAATTCAGTCGACTTAATCATTGCAAAAGGTATGGCGCACTACGAGTACTTAACAGATATTGATATAGGTAAGCCTGT
GTTACATATCTTCATACCTAAATGCGACCCCATCTCTAGAAGCCTTGGCTCGGTAACTTACCGTGGTAAACTGGTGGTAT
ATTTAAGGTTTCCGGGATCAAAACTGTGA

Upstream 100 bases:

>100_bases
AGACAACTATGCTGAGAAATATATATTTTTGTCCAATAATTAATAGTCAAATCAAGATTTATCACGGCATCATACATAGT
GAATCAGCAGGGATAACGAC

Downstream 100 bases:

>100_bases
TCCTCCTCACATGGGAACCGGAATCCACTAGGTCAAGATATCTCACGGTGTATGTATGAATTATATCTATTATTAGGTCT
GGTGGAACCCGTTTCCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQLTVTAPGVLDYYRLVKTQSM
RRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGVMDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMF
LLDNAGEAVYDSLLVEYLRGKGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL
LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGSKL

Sequences:

>Translated_302_residues
MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQLTVTAPGVLDYYRLVKTQSM
RRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGVMDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMF
LLDNAGEAVYDSLLVEYLRGKGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL
LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGSKL
>Mature_302_residues
MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQLTVTAPGVLDYYRLVKTQSM
RRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGVMDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMF
LLDNAGEAVYDSLLVEYLRGKGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL
LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGSKL

Specific function: Unknown

COG id: COG1578

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002791
- InterPro:   IPR014444 [H]

Pfam domain/function: PF01937 DUF89 [H]

EC number: NA

Molecular weight: Translated: 34164; Mature: 34164

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LTVTAPGVLDYYRLVKTQSMRRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMFLLDNAGEAVYDSLLVEYLRG
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC
KGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGS
HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCEEECCEEEEEEECCCC
KL
CC
>Mature Secondary Structure
MKPQTECLRCILTTRLREIEYSSLSPGEKIVLAKRIMSKLVNDFSLDSTELTRLASDLFQ
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LTVTAPGVLDYYRLVKTQSMRRALALRDAHREHARYLDDYRRLRYLLKVSALGNLIDYGV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MDHNFNEEIDPGIAENVEIAIDDSVKFYELVRKGGLKIMFLLDNAGEAVYDSLLVEYLRG
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC
KGNTTIGVVKDEPGFQNDVTLNDFIEIGLDKVFDKIVTPGCRSICSSIHLDKVSEDFKSL
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNSVDLIIAKGMAHYEYLTDIDIGKPVLHIFIPKCDPISRSLGSVTYRGKLVVYLRFPGS
HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCEEECCEEEEEEECCCC
KL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]