| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is ywrD [H]
Identifier: 218883509
GI number: 218883509
Start: 184323
End: 185831
Strand: Direct
Name: ywrD [H]
Synonym: DKAM_0196
Alternate gene names: 218883509
Gene position: 184323-185831 (Clockwise)
Preceding gene: 218883508
Following gene: 218883516
Centisome position: 13.5
GC content: 47.18
Gene sequence:
>1509_bases ATGCCCGTAGCTAAGCTCGGCATAGGATTTAAGGGTGTAGTAGCTGACCATCCCTTAGCTGTAAAGACCGGGTTAGACGT GCTGGAGGAAGGAGGCAACGCATTTGATGCATCCATAGCCATTAGCGCTGTTTTATCGGTTGTACAGCCCCAAATGGGTG GGCCCGGAGGCGATGGATTCCTATTAGGCTTCGTAGGAGACAAGGTTGTTGCCTACGCGTCCTCAGGCCGCTCGCCCAGC GGATTCAACGCCGATGAATACATTAGGGAAAAACCTCTAAGAGGATCTCTAACAGTAACGATCCCCGGGCTCGTATACCT ATGGGGTATGGTTAACGAGGAGTATGGAACACTTGATTTAGCGACACTATTGAAGCCAGCAATATCACTGGCATATAATG GATTTAACGCTGGATATACCCTGGCGAGATCCATTGAGGCGGTTGAAAAAGAATTATCTGGGTTCAAGTGGGCTAAATAC TATAAAGGGGTTAAACTAGGCAGCAAAATCACCAATAAAGACGCTGCTAGAACCCTTAGGCTAATCGCGTCGAGGGGCTG GGAAGAATTCTACCAGGGGGAGTTAGCTGAGGAACTAACCAGGGAACTACAGGATCAAGGAGTTAATATAGGGCTTGAAG ACCTTATGACCCACGAAGGCTTTAAAGTAGATCCCCTCAGGCTAGAGGTGGAAGGAAGAATACTCTATGAGCTCCCGCCA AACACTCAAGGAGCATCAACGCTCCAGCTGATCAGCGCGCTCTATGAGGAAGAGTTATCCAGGTACGGGTTCCATGATCC TCAGCGGGCTAGCGCCTGGAGTAAACCAGTTGATATCGTCTACACATTCAGAGACATCTATCTAGGTGACCCCGACTACA TGGAGATAGATGTAAACGAGTATTTGAGATATAGTAGGGTAAAGAAGCTTATCGAACACAGTGTAAGTCAAAGCAGTACA CGTGTAAAACATGGAGGAGATACAACATTCTTCATCGTCTCCGATGGAGAATCATTGATCGGATTCATCCAAAGCCTCTT TCATCCATTCGGCTCAGGGCTAATGATGGGCGGCTTCCCAGTGCAGAATAGAGGAATAGGATTCGCGAAGGAGCATGGAT TACCTAACAGCCCTGCACCCAGGAAATTACCCCTCCACACGTTATCAATTCTAGGCGTAGTTGAAGACGATAAAAAATAT ATTATAGGCTGTGTAGGAGGAGACTACAGGCCCCAACTACATCTAAGGGTATATGAAAACATGTTCGTATATGGAATGGA CCCCGTAAAAGCAGTTGCAGCCCCTCGATTCATCTATGTGGAACCCCGTGGAAGCCAAAGACTCGTCTTAGAGAAACCAC TTGAGGCTAATACGGTTGGAGGCATAAGTATCGAAGAAGTAGAGTATTTTGGAAGCCATGGACATGTACATGTAGCCATC CTAGACGATGAAAAATTAATACTTGCCGGCGACCCACGTAGCGAGGGAATAGCTATAGCCATAAACTAG
Upstream 100 bases:
>100_bases GGAACACACAGTAGAGATACTTCAGGAGCTTGGATACACCCCGGAGGAAATAAGCAGGCTTAAAGAGGCGGGCATCATAT ATTATCCATAGGAGGTCATC
Downstream 100 bases:
>100_bases ATTACAGCGTTATTTTTCCTCCACAACCTCGACCCCTTTATTACGTGGTCTAGTAATGAATACCTTCCCGTCGAGTCTTG GCATCAAATTCTCTAAGATC
Product: gamma-glutamyltranspeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MPVAKLGIGFKGVVADHPLAVKTGLDVLEEGGNAFDASIAISAVLSVVQPQMGGPGGDGFLLGFVGDKVVAYASSGRSPS GFNADEYIREKPLRGSLTVTIPGLVYLWGMVNEEYGTLDLATLLKPAISLAYNGFNAGYTLARSIEAVEKELSGFKWAKY YKGVKLGSKITNKDAARTLRLIASRGWEEFYQGELAEELTRELQDQGVNIGLEDLMTHEGFKVDPLRLEVEGRILYELPP NTQGASTLQLISALYEEELSRYGFHDPQRASAWSKPVDIVYTFRDIYLGDPDYMEIDVNEYLRYSRVKKLIEHSVSQSST RVKHGGDTTFFIVSDGESLIGFIQSLFHPFGSGLMMGGFPVQNRGIGFAKEHGLPNSPAPRKLPLHTLSILGVVEDDKKY IIGCVGGDYRPQLHLRVYENMFVYGMDPVKAVAAPRFIYVEPRGSQRLVLEKPLEANTVGGISIEEVEYFGSHGHVHVAI LDDEKLILAGDPRSEGIAIAIN
Sequences:
>Translated_502_residues MPVAKLGIGFKGVVADHPLAVKTGLDVLEEGGNAFDASIAISAVLSVVQPQMGGPGGDGFLLGFVGDKVVAYASSGRSPS GFNADEYIREKPLRGSLTVTIPGLVYLWGMVNEEYGTLDLATLLKPAISLAYNGFNAGYTLARSIEAVEKELSGFKWAKY YKGVKLGSKITNKDAARTLRLIASRGWEEFYQGELAEELTRELQDQGVNIGLEDLMTHEGFKVDPLRLEVEGRILYELPP NTQGASTLQLISALYEEELSRYGFHDPQRASAWSKPVDIVYTFRDIYLGDPDYMEIDVNEYLRYSRVKKLIEHSVSQSST RVKHGGDTTFFIVSDGESLIGFIQSLFHPFGSGLMMGGFPVQNRGIGFAKEHGLPNSPAPRKLPLHTLSILGVVEDDKKY IIGCVGGDYRPQLHLRVYENMFVYGMDPVKAVAAPRFIYVEPRGSQRLVLEKPLEANTVGGISIEEVEYFGSHGHVHVAI LDDEKLILAGDPRSEGIAIAIN >Mature_501_residues PVAKLGIGFKGVVADHPLAVKTGLDVLEEGGNAFDASIAISAVLSVVQPQMGGPGGDGFLLGFVGDKVVAYASSGRSPSG FNADEYIREKPLRGSLTVTIPGLVYLWGMVNEEYGTLDLATLLKPAISLAYNGFNAGYTLARSIEAVEKELSGFKWAKYY KGVKLGSKITNKDAARTLRLIASRGWEEFYQGELAEELTRELQDQGVNIGLEDLMTHEGFKVDPLRLEVEGRILYELPPN TQGASTLQLISALYEEELSRYGFHDPQRASAWSKPVDIVYTFRDIYLGDPDYMEIDVNEYLRYSRVKKLIEHSVSQSSTR VKHGGDTTFFIVSDGESLIGFIQSLFHPFGSGLMMGGFPVQNRGIGFAKEHGLPNSPAPRKLPLHTLSILGVVEDDKKYI IGCVGGDYRPQLHLRVYENMFVYGMDPVKAVAAPRFIYVEPRGSQRLVLEKPLEANTVGGISIEEVEYFGSHGHVHVAIL DDEKLILAGDPRSEGIAIAIN
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=477, Percent_Identity=25.3668763102725, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI73915090, Length=477, Percent_Identity=25.3668763102725, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI73915096, Length=477, Percent_Identity=25.3668763102725, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI73915094, Length=477, Percent_Identity=25.3668763102725, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI113429324, Length=473, Percent_Identity=24.9471458773784, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI113429326, Length=482, Percent_Identity=24.6887966804979, Blast_Score=102, Evalue=6e-22, Organism=Escherichia coli, GI1789856, Length=529, Percent_Identity=27.2211720226843, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17542894, Length=458, Percent_Identity=24.235807860262, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI72000294, Length=389, Percent_Identity=23.3933161953728, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI212646519, Length=389, Percent_Identity=23.3933161953728, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193208245, Length=217, Percent_Identity=28.110599078341, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193208247, Length=217, Percent_Identity=28.110599078341, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17506189, Length=310, Percent_Identity=24.1935483870968, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI45551474, Length=481, Percent_Identity=20.997920997921, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI161077878, Length=481, Percent_Identity=20.997920997921, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24642670, Length=481, Percent_Identity=20.997920997921, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24642666, Length=481, Percent_Identity=20.997920997921, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI161077880, Length=481, Percent_Identity=20.997920997921, Blast_Score=90, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 55023; Mature: 54892
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVAKLGIGFKGVVADHPLAVKTGLDVLEEGGNAFDASIAISAVLSVVQPQMGGPGGDGF CCCCCCCCCEEEEECCCCEEEHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCE LLGFVGDKVVAYASSGRSPSGFNADEYIREKPLRGSLTVTIPGLVYLWGMVNEEYGTLDL EEEEECCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCHH ATLLKPAISLAYNGFNAGYTLARSIEAVEKELSGFKWAKYYKGVKLGSKITNKDAARTLR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHH LIASRGWEEFYQGELAEELTRELQDQGVNIGLEDLMTHEGFKVDPLRLEVEGRILYELPP HHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECCEEEEECCEEEEECCC NTQGASTLQLISALYEEELSRYGFHDPQRASAWSKPVDIVYTFRDIYLGDPDYMEIDVNE CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEEEEEECCCCEEEEEHHH YLRYSRVKKLIEHSVSQSSTRVKHGGDTTFFIVSDGESLIGFIQSLFHPFGSGLMMGGFP HHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEECCCC VQNRGIGFAKEHGLPNSPAPRKLPLHTLSILGVVEDDKKYIIGCVGGDYRPQLHLRVYEN CCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCEEEEEEECC MFVYGMDPVKAVAAPRFIYVEPRGSQRLVLEKPLEANTVGGISIEEVEYFGSHGHVHVAI EEEEECCHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEE LDDEKLILAGDPRSEGIAIAIN ECCCEEEEECCCCCCCEEEEEC >Mature Secondary Structure PVAKLGIGFKGVVADHPLAVKTGLDVLEEGGNAFDASIAISAVLSVVQPQMGGPGGDGF CCCCCCCCEEEEECCCCEEEHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCE LLGFVGDKVVAYASSGRSPSGFNADEYIREKPLRGSLTVTIPGLVYLWGMVNEEYGTLDL EEEEECCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCHH ATLLKPAISLAYNGFNAGYTLARSIEAVEKELSGFKWAKYYKGVKLGSKITNKDAARTLR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHH LIASRGWEEFYQGELAEELTRELQDQGVNIGLEDLMTHEGFKVDPLRLEVEGRILYELPP HHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECCEEEEECCEEEEECCC NTQGASTLQLISALYEEELSRYGFHDPQRASAWSKPVDIVYTFRDIYLGDPDYMEIDVNE CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEEEEEECCCCEEEEEHHH YLRYSRVKKLIEHSVSQSSTRVKHGGDTTFFIVSDGESLIGFIQSLFHPFGSGLMMGGFP HHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEECCCC VQNRGIGFAKEHGLPNSPAPRKLPLHTLSILGVVEDDKKYIIGCVGGDYRPQLHLRVYEN CCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCEEEEEEECC MFVYGMDPVKAVAAPRFIYVEPRGSQRLVLEKPLEANTVGGISIEEVEYFGSHGHVHVAI EEEEECCHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEE LDDEKLILAGDPRSEGIAIAIN ECCCEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]