| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883516
Identifier: 218883516
GI number: 218883516
Start: 191722
End: 192516
Strand: Direct
Name: 218883516
Synonym: DKAM_0203
Alternate gene names: NA
Gene position: 191722-192516 (Clockwise)
Preceding gene: 218883509
Following gene: 218883518
Centisome position: 14.04
GC content: 41.38
Gene sequence:
>795_bases ATGATAGCTAGAATACCTTTACTTCTACTCTTTACCACCATGGTATTTTCAAGCATCATCAGTGTACACGCTGGCTCTGT CACCGTTAATATAGCTGGGCTTTATGCTTCGATAATATATGATCCATTAGAGGATAATGGGGTGTTCGATCTAAACATCA CTCTTTCAAGTAGGAGTGAAACCCCTGTTGAACTGACGCTGGATAATCCATTTGATCCATCTGTAAGCCTCTCCTTGGTC TCAGTGGATTGTGAGCCAGGTGGAAACGTTGTTGTAGATTATGATGTCGATAGTATCACTATATTATTTAACAATACGAG CTGGGTGATGTTGTACTTCACTATAGAGGGCTTCATGGAGTCCAGTAGCCTTGGGTCTTACGTTGCCTACATAGACTTAA CTGGTTATAACGATGTAGCGAACCTATTGTTAACGCTTCAAATACCATATGGATACCAGGTAAATGTAATGCCTTCAACA GGTGTCACTGTATCGCAGGGTAATGAATCAATAATAGTGAACTTATCCCAGGCGCTTCTCTACACTGTAACAACATGGGT TCCTGTAACAGAGGCTACCACATCACCCACGGCAACTATGACGACAATTACTAGCAGCACCACGTTAACTACCATTGGTA CATCGGCTACAGCTATTACTACGTCTACAGAGCCAGCTACTGAATCGATCCCTGTAACTCATGGAGTATTAGGCAGTATC CTACCATTGGCGATAGGTATAATAATTATAGTGATGATCATTGTAATACTGGTTTTCTATGGGTATAGAAGATAG
Upstream 100 bases:
>100_bases GGGCCAGGGGCTAACCCAGCTAACAAAACATCAGCGGGGAAACGCTGGGATGTTATATAGAGCTATAGAGCTTAGGTTTA TAAGTAGGGGTTGATGATGT
Downstream 100 bases:
>100_bases TTTCCTCTCTTAATGGACTTTTTAAATGCCTATCCTATATAGGTTCAGCCACTACACAACAAGTTCTAAATAAGAACGAC GAGGCTTGGAGGTCATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MIARIPLLLLFTTMVFSSIISVHAGSVTVNIAGLYASIIYDPLEDNGVFDLNITLSSRSETPVELTLDNPFDPSVSLSLV SVDCEPGGNVVVDYDVDSITILFNNTSWVMLYFTIEGFMESSSLGSYVAYIDLTGYNDVANLLLTLQIPYGYQVNVMPST GVTVSQGNESIIVNLSQALLYTVTTWVPVTEATTSPTATMTTITSSTTLTTIGTSATAITTSTEPATESIPVTHGVLGSI LPLAIGIIIIVMIIVILVFYGYRR
Sequences:
>Translated_264_residues MIARIPLLLLFTTMVFSSIISVHAGSVTVNIAGLYASIIYDPLEDNGVFDLNITLSSRSETPVELTLDNPFDPSVSLSLV SVDCEPGGNVVVDYDVDSITILFNNTSWVMLYFTIEGFMESSSLGSYVAYIDLTGYNDVANLLLTLQIPYGYQVNVMPST GVTVSQGNESIIVNLSQALLYTVTTWVPVTEATTSPTATMTTITSSTTLTTIGTSATAITTSTEPATESIPVTHGVLGSI LPLAIGIIIIVMIIVILVFYGYRR >Mature_264_residues MIARIPLLLLFTTMVFSSIISVHAGSVTVNIAGLYASIIYDPLEDNGVFDLNITLSSRSETPVELTLDNPFDPSVSLSLV SVDCEPGGNVVVDYDVDSITILFNNTSWVMLYFTIEGFMESSSLGSYVAYIDLTGYNDVANLLLTLQIPYGYQVNVMPST GVTVSQGNESIIVNLSQALLYTVTTWVPVTEATTSPTATMTTITSSTTLTTIGTSATAITTSTEPATESIPVTHGVLGSI LPLAIGIIIIVMIIVILVFYGYRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28261; Mature: 28261
Theoretical pI: Translated: 3.64; Mature: 3.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARIPLLLLFTTMVFSSIISVHAGSVTVNIAGLYASIIYDPLEDNGVFDLNITLSSRSE CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHEEEEEEECCCCCCCEEEEEEEECCCCC TPVELTLDNPFDPSVSLSLVSVDCEPGGNVVVDYDVDSITILFNNTSWVMLYFTIEGFME CCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEEEECCCEEEEEEEEECHHC SSSLGSYVAYIDLTGYNDVANLLLTLQIPYGYQVNVMPSTGVTVSQGNESIIVNLSQALL CCCCCCEEEEEEECCCCHHEEEEEEEEECCCEEEEEECCCCEEEECCCCEEEEEEHHHEE YTVTTWVPVTEATTSPTATMTTITSSTTLTTIGTSATAITTSTEPATESIPVTHGVLGSI EEEEEEEEEECCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHH LPLAIGIIIIVMIIVILVFYGYRR HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIARIPLLLLFTTMVFSSIISVHAGSVTVNIAGLYASIIYDPLEDNGVFDLNITLSSRSE CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHEEEEEEECCCCCCCEEEEEEEECCCCC TPVELTLDNPFDPSVSLSLVSVDCEPGGNVVVDYDVDSITILFNNTSWVMLYFTIEGFME CCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEEEECCCEEEEEEEEECHHC SSSLGSYVAYIDLTGYNDVANLLLTLQIPYGYQVNVMPSTGVTVSQGNESIIVNLSQALL CCCCCCEEEEEEECCCCHHEEEEEEEEECCCEEEEEECCCCEEEECCCCEEEEEEHHHEE YTVTTWVPVTEATTSPTATMTTITSSTTLTTIGTSATAITTSTEPATESIPVTHGVLGSI EEEEEEEEEECCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHH LPLAIGIIIIVMIIVILVFYGYRR HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA