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The map label for this gene is 218883478

Identifier: 218883478

GI number: 218883478

Start: 152250

End: 153938

Strand: Direct

Name: 218883478

Synonym: DKAM_0164

Alternate gene names: NA

Gene position: 152250-153938 (Clockwise)

Preceding gene: 218883476

Following gene: 218883479

Centisome position: 11.15

GC content: 45.06

Gene sequence:

>1689_bases
GTGAAGAAATCAGGTATACACGTTCACTCAGAGGTCTATGCGTCTTTCACGGGCTTCATGTTCCTGGTTTCCCTAGTTGC
ATCAATATCTTTAATTGTTTTGGCTGTATTCTTATTTCACAACCCGCTCCTCGTAATCATACTGGTCATTCTTCCCACTA
TAGTCTTATTACTCATGGTGTCCCTCCCATCCCTCATCGCGACTAGCCGGGCTTCATCGATTGATGGAGAGTTCCCGTTT
CTATCAGCTTATCTCAGTACGATGGTTATGAGTGGTCTTTCGCCATACATAGCTTTTGAGAGGGTTTTGAGGGGCAGTAT
TATATTTAAGAGGAGTAGTGAGCTGGCCCAGAGATTCATATTGTTAAGCAGGGTTCTCGGAAGGGATCCATTAACGGCTT
TCGATGAGCTCTCTCAGAGGGTTGCTAGCTCTAGGGTTAAGGAGACTTTGTCAGGTTATATAGCCACAGTGAAGGCTGGG
GGAGACGTTATTGATTACCTCAATAAGAGATCTAGGTTGCTCTTCAACGAGATGCTTGTCGGCATGAAAATTATTGCCGA
CAGGCTTGGTGGGCTCCTCGAGGCTTACTTAGCCATGGTTTTATTAACCATGATAAGCTTTACCGTGCTATACTTCGTGA
CCACGGGATTTGCTGGGGTGGTGCCTTTTGGTTTATCAAGTGGGGGAATGTACTTCTTCCTTTACATAGTTATGCCTTTG
TTAAGCGGCGTCATAATATATTTGGCTGATCTACTCCAGTATAAGGATCCATATATGGATTGGAAGCCCTACATGGTGTT
CTTCGCCACCTTTATACCTATAATACTAGTCCTCTCATTATTCGGTATATTCTTCTACCTAATGCTTCCACCATATAATC
CATTGAGATTAAACCCCGTTACCCAATTCATTGGGGAAATGCTCCTGTTATTCGGCGTGGGCAACCCACCCGGCTACATG
TACTCAACTATAGCTTTATCAACAGCGTTAATTATAGCTACCATACCCGGCTTCATCTACTATTTGTATGTATCAAGGGA
GTATAAGGTGGTGAGAGGTATAACAAGGTTCCTCAGAGACCTAGTCGAGGTAAGGAAAACCGGGTTACCACCTGAGAGAA
GCATTATAGAGCTCAGTAGTAGGGACTACGGTGTCTTCACCCAATACCTTAGGAAGGCGGCTATGGAGCTAAGCATAGGT
GTTCCATTAAGGAGAATTATTGATGAGTTAATGAAGAAGATAAGGTCTTGGACGGGGCAGGTACTATTATTCATACTCAC
GGACTCCATAGAAGTCGGGGGAGGAACAGTAGAGGTGCTTGAGAACCTAGCATGGTTCGCAGAGAGCGTTGAAGCAATAG
AGGATGAGAAGAAGAGGAGCCTAAGGACCCTCATGATAGTCCCATACATGGGCGGGATACTCTCAGCGGTTACAGTAATA
TACATGGTTAGCTACATGGCTAAACTACCGGTGCAGGTGGGGGCATTTGGTCAGGCAGCTGGGCTGGTCTTACCTAGCAT
AGTATTAACTGGGCTGGTCTTACCTAGCATAGTATTAAATAACTATATCATGGGGCTTGTCGCGGGTAAAATATCCTCGG
GTAGATTGATAGCTGGATTATTCCACGCCATACTACTGACCCTAATAACTCTGGCGGCGATACTGGTTTCACCATTATTC
ACGGGGTAG

Upstream 100 bases:

>100_bases
GGTAGGTGTATATATTATGAGGTTTTGGAACTGGATCTACCGTCATTTCCACTGGATCGGTGAGCGGATTTTAAAATGGT
TTCCAAACATATCTGACTCT

Downstream 100 bases:

>100_bases
TGTATGATATGGTTAGAAGCAGTAGAGCTGTAAGCGAAATATTGGCTGGAGTAATATTATTCACAGTGGTAACCCTGATA
TCCCTCGCCATATTCTTTTA

Product: type II secretion system protein

Products: NA

Alternate protein names: Type II Secretion System F Domain-Containing Protein; Type II Secretion System F Domain Protein; Type II Secretion System F Domain

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MKKSGIHVHSEVYASFTGFMFLVSLVASISLIVLAVFLFHNPLLVIILVILPTIVLLLMVSLPSLIATSRASSIDGEFPF
LSAYLSTMVMSGLSPYIAFERVLRGSIIFKRSSELAQRFILLSRVLGRDPLTAFDELSQRVASSRVKETLSGYIATVKAG
GDVIDYLNKRSRLLFNEMLVGMKIIADRLGGLLEAYLAMVLLTMISFTVLYFVTTGFAGVVPFGLSSGGMYFFLYIVMPL
LSGVIIYLADLLQYKDPYMDWKPYMVFFATFIPIILVLSLFGIFFYLMLPPYNPLRLNPVTQFIGEMLLLFGVGNPPGYM
YSTIALSTALIIATIPGFIYYLYVSREYKVVRGITRFLRDLVEVRKTGLPPERSIIELSSRDYGVFTQYLRKAAMELSIG
VPLRRIIDELMKKIRSWTGQVLLFILTDSIEVGGGTVEVLENLAWFAESVEAIEDEKKRSLRTLMIVPYMGGILSAVTVI
YMVSYMAKLPVQVGAFGQAAGLVLPSIVLTGLVLPSIVLNNYIMGLVAGKISSGRLIAGLFHAILLTLITLAAILVSPLF
TG

Sequences:

>Translated_562_residues
MKKSGIHVHSEVYASFTGFMFLVSLVASISLIVLAVFLFHNPLLVIILVILPTIVLLLMVSLPSLIATSRASSIDGEFPF
LSAYLSTMVMSGLSPYIAFERVLRGSIIFKRSSELAQRFILLSRVLGRDPLTAFDELSQRVASSRVKETLSGYIATVKAG
GDVIDYLNKRSRLLFNEMLVGMKIIADRLGGLLEAYLAMVLLTMISFTVLYFVTTGFAGVVPFGLSSGGMYFFLYIVMPL
LSGVIIYLADLLQYKDPYMDWKPYMVFFATFIPIILVLSLFGIFFYLMLPPYNPLRLNPVTQFIGEMLLLFGVGNPPGYM
YSTIALSTALIIATIPGFIYYLYVSREYKVVRGITRFLRDLVEVRKTGLPPERSIIELSSRDYGVFTQYLRKAAMELSIG
VPLRRIIDELMKKIRSWTGQVLLFILTDSIEVGGGTVEVLENLAWFAESVEAIEDEKKRSLRTLMIVPYMGGILSAVTVI
YMVSYMAKLPVQVGAFGQAAGLVLPSIVLTGLVLPSIVLNNYIMGLVAGKISSGRLIAGLFHAILLTLITLAAILVSPLF
TG
>Mature_562_residues
MKKSGIHVHSEVYASFTGFMFLVSLVASISLIVLAVFLFHNPLLVIILVILPTIVLLLMVSLPSLIATSRASSIDGEFPF
LSAYLSTMVMSGLSPYIAFERVLRGSIIFKRSSELAQRFILLSRVLGRDPLTAFDELSQRVASSRVKETLSGYIATVKAG
GDVIDYLNKRSRLLFNEMLVGMKIIADRLGGLLEAYLAMVLLTMISFTVLYFVTTGFAGVVPFGLSSGGMYFFLYIVMPL
LSGVIIYLADLLQYKDPYMDWKPYMVFFATFIPIILVLSLFGIFFYLMLPPYNPLRLNPVTQFIGEMLLLFGVGNPPGYM
YSTIALSTALIIATIPGFIYYLYVSREYKVVRGITRFLRDLVEVRKTGLPPERSIIELSSRDYGVFTQYLRKAAMELSIG
VPLRRIIDELMKKIRSWTGQVLLFILTDSIEVGGGTVEVLENLAWFAESVEAIEDEKKRSLRTLMIVPYMGGILSAVTVI
YMVSYMAKLPVQVGAFGQAAGLVLPSIVLTGLVLPSIVLNNYIMGLVAGKISSGRLIAGLFHAILLTLITLAAILVSPLF
TG

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62139; Mature: 62139

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSGIHVHSEVYASFTGFMFLVSLVASISLIVLAVFLFHNPLLVIILVILPTIVLLLMV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SLPSLIATSRASSIDGEFPFLSAYLSTMVMSGLSPYIAFERVLRGSIIFKRSSELAQRFI
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECHHHHHHHHH
LLSRVLGRDPLTAFDELSQRVASSRVKETLSGYIATVKAGGDVIDYLNKRSRLLFNEMLV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GMKIIADRLGGLLEAYLAMVLLTMISFTVLYFVTTGFAGVVPFGLSSGGMYFFLYIVMPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LSGVIIYLADLLQYKDPYMDWKPYMVFFATFIPIILVLSLFGIFFYLMLPPYNPLRLNPV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
TQFIGEMLLLFGVGNPPGYMYSTIALSTALIIATIPGFIYYLYVSREYKVVRGITRFLRD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVEVRKTGLPPERSIIELSSRDYGVFTQYLRKAAMELSIGVPLRRIIDELMKKIRSWTGQ
HHHHHHCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VLLFILTDSIEVGGGTVEVLENLAWFAESVEAIEDEKKRSLRTLMIVPYMGGILSAVTVI
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMVSYMAKLPVQVGAFGQAAGLVLPSIVLTGLVLPSIVLNNYIMGLVAGKISSGRLIAGL
HHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FHAILLTLITLAAILVSPLFTG
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA