Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883476

Identifier: 218883476

GI number: 218883476

Start: 149480

End: 150298

Strand: Direct

Name: 218883476

Synonym: DKAM_0162

Alternate gene names: NA

Gene position: 149480-150298 (Clockwise)

Preceding gene: 218883474

Following gene: 218883478

Centisome position: 10.95

GC content: 42.25

Gene sequence:

>819_bases
GTGTATTATGTTTTGAGCGATTTTCAGGATTTAACAGGGTTGAAACACGATCCAAGTAGTCTTAATTTACTTGAAGACCC
TGTTAAAGAGGCTGAATTATTTTTAAGAGGACAGTATGTTGAAACCGTTACCATTACATTGGCTGATTTCGTAGAACTTA
TCTCTTCAAGGCTCTCAAAGGGCTCCTACCTGCTCTCCTGCCGGGATGACATCAGCTACACCATACTAGTCGAGGACGGG
GTAATCAAGTCAATAGTCGAATATTTTGAGACATCGATTAGAATACCGGGGTATATGGCTCTAAGGGATTTCAGTAGAAA
GCTTGCATCATCGATGATTGAGTGCCGCGTATTCAACCTCACAGCTAAGCAGAGAGAAAGGGAATCAGGAGCACAGGTTA
GTGTGCAAGCTGGGGAAGTAAAAGTGGCACAACCTGTAGAACCCGGTGGTAAATCTATAGAGAGTGCGAAACCAGCTGCC
CCACTAGCAGGAGAGGGGGCTGCTCATCGAATCACCGATACTGTGAAACCAGTTGTCCCGCCAGCTATAGATCAAGATAG
ATTAAAGGGATTTGTAAAGCATTTAAGAGATATTATAAGTGAGACAGCTGAACTATATGGATGTGTGATGATCGATAATA
TCTCAACCGATCTAAGCAACGAGGTATTAGTGGTTAAGGTTAAGCTCAGAAAGAGGGGGTTGTTTGGTAAATGTAGAGAT
AGCGAATTAAAGACTAATATAGAGAAGGATTTACCGATACTAAAGGAGTTACATGAGGTGGGCTTGGAGGTTAGAATAGA
GTTTCAACTAATCGGCTAA

Upstream 100 bases:

>100_bases
ATGTATTACTCATGGTGAACCACACTACAATCCTTATTCTTCCCTGATTTAGGAGTGAACCCTTATAAGTAAATCTCATC
TAGATAAATACTGGGAACAG

Downstream 100 bases:

>100_bases
CCTCTAGGTGCGAGATTCAATGCTATTAAATCTACCCGGCGTCAGGCCTGGTTTCTGCTGTGATCTCCTCACTGATCTTC
TCCTTACTCTCCCCTCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MYYVLSDFQDLTGLKHDPSSLNLLEDPVKEAELFLRGQYVETVTITLADFVELISSRLSKGSYLLSCRDDISYTILVEDG
VIKSIVEYFETSIRIPGYMALRDFSRKLASSMIECRVFNLTAKQRERESGAQVSVQAGEVKVAQPVEPGGKSIESAKPAA
PLAGEGAAHRITDTVKPVVPPAIDQDRLKGFVKHLRDIISETAELYGCVMIDNISTDLSNEVLVVKVKLRKRGLFGKCRD
SELKTNIEKDLPILKELHEVGLEVRIEFQLIG

Sequences:

>Translated_272_residues
MYYVLSDFQDLTGLKHDPSSLNLLEDPVKEAELFLRGQYVETVTITLADFVELISSRLSKGSYLLSCRDDISYTILVEDG
VIKSIVEYFETSIRIPGYMALRDFSRKLASSMIECRVFNLTAKQRERESGAQVSVQAGEVKVAQPVEPGGKSIESAKPAA
PLAGEGAAHRITDTVKPVVPPAIDQDRLKGFVKHLRDIISETAELYGCVMIDNISTDLSNEVLVVKVKLRKRGLFGKCRD
SELKTNIEKDLPILKELHEVGLEVRIEFQLIG
>Mature_272_residues
MYYVLSDFQDLTGLKHDPSSLNLLEDPVKEAELFLRGQYVETVTITLADFVELISSRLSKGSYLLSCRDDISYTILVEDG
VIKSIVEYFETSIRIPGYMALRDFSRKLASSMIECRVFNLTAKQRERESGAQVSVQAGEVKVAQPVEPGGKSIESAKPAA
PLAGEGAAHRITDTVKPVVPPAIDQDRLKGFVKHLRDIISETAELYGCVMIDNISTDLSNEVLVVKVKLRKRGLFGKCRD
SELKTNIEKDLPILKELHEVGLEVRIEFQLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30273; Mature: 30273

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYVLSDFQDLTGLKHDPSSLNLLEDPVKEAELFLRGQYVETVTITLADFVELISSRLSK
CEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCC
GSYLLSCRDDISYTILVEDGVIKSIVEYFETSIRIPGYMALRDFSRKLASSMIECRVFNL
CCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEC
TAKQRERESGAQVSVQAGEVKVAQPVEPGGKSIESAKPAAPLAGEGAAHRITDTVKPVVP
HHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PAIDQDRLKGFVKHLRDIISETAELYGCVMIDNISTDLSNEVLVVKVKLRKRGLFGKCRD
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC
SELKTNIEKDLPILKELHEVGLEVRIEFQLIG
CHHHHCHHHCCHHHHHHHHCCCEEEEEEEEEC
>Mature Secondary Structure
MYYVLSDFQDLTGLKHDPSSLNLLEDPVKEAELFLRGQYVETVTITLADFVELISSRLSK
CEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCC
GSYLLSCRDDISYTILVEDGVIKSIVEYFETSIRIPGYMALRDFSRKLASSMIECRVFNL
CCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEC
TAKQRERESGAQVSVQAGEVKVAQPVEPGGKSIESAKPAAPLAGEGAAHRITDTVKPVVP
HHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
PAIDQDRLKGFVKHLRDIISETAELYGCVMIDNISTDLSNEVLVVKVKLRKRGLFGKCRD
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC
SELKTNIEKDLPILKELHEVGLEVRIEFQLIG
CHHHHCHHHCCHHHHHHHHCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA