Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883474

Identifier: 218883474

GI number: 218883474

Start: 147894

End: 148439

Strand: Direct

Name: 218883474

Synonym: DKAM_0160

Alternate gene names: NA

Gene position: 147894-148439 (Clockwise)

Preceding gene: 218883473

Following gene: 218883476

Centisome position: 10.83

GC content: 45.42

Gene sequence:

>546_bases
ATGGTGATATATGCTGGTATAGATCTAGCTGGTTCACCGAGGAATCCAACAGGCGTAGCATTAATCAAGCACAACGGTAG
GACCAGAATAGTTTTTATAGGAGTCCTTTACAGTGATGGAGAAATAATCGACTTACTGGGGAGATTTAAGCCCAATATAG
TTGCACTAGACGCCCCCTTAACGCCTGGCCATGGTTACCGTGAAGTGGATCTCTTACTCCTGAATAATGGATACAGGGTA
TTGCCCCCGGGTTGGCATGGTATGAGGCTCCTCTATGAGAGGGCTGCTAGATTATCTAGAATACTTTTCAATATGGGTAT
TAGAGTCGTAGAGACTCATCCACGGAGTGCTTTAAAGTCAAGTGGATGTAGGAGCATTTATGAGTTAGCAGAGAAGATGA
GTCTCCCAGCTAGAACTGGCCTAACCAGGGATGAGGAGGACGCTTTAATAGCTTCTATTGTTGCAATGGAGTATGCTAGA
GGAGAAGCTGTCTCATTCAAGGCTCCTGACGGCGAGATCTTCCTTCTTAAACCCCTGTGTGGTTAA

Upstream 100 bases:

>100_bases
CCTCGACGCCTAACGAGCTACCAAGCTGGATGAGGATGGTTGAAGACATGGTTGAAGAATACAGGAGGATAATAGGATTC
AATAAGGGAGAAAGAGTTAA

Downstream 100 bases:

>100_bases
ATTGGCTGTAAAAGCCTTGAGTACTCTTCTATTCTACTGGCAATATGTTTTAACAATGCTTCCCTCGAAATCTTGGATAA
AACCCTGATCCTCCATGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVIYAGIDLAGSPRNPTGVALIKHNGRTRIVFIGVLYSDGEIIDLLGRFKPNIVALDAPLTPGHGYREVDLLLLNNGYRV
LPPGWHGMRLLYERAARLSRILFNMGIRVVETHPRSALKSSGCRSIYELAEKMSLPARTGLTRDEEDALIASIVAMEYAR
GEAVSFKAPDGEIFLLKPLCG

Sequences:

>Translated_181_residues
MVIYAGIDLAGSPRNPTGVALIKHNGRTRIVFIGVLYSDGEIIDLLGRFKPNIVALDAPLTPGHGYREVDLLLLNNGYRV
LPPGWHGMRLLYERAARLSRILFNMGIRVVETHPRSALKSSGCRSIYELAEKMSLPARTGLTRDEEDALIASIVAMEYAR
GEAVSFKAPDGEIFLLKPLCG
>Mature_181_residues
MVIYAGIDLAGSPRNPTGVALIKHNGRTRIVFIGVLYSDGEIIDLLGRFKPNIVALDAPLTPGHGYREVDLLLLNNGYRV
LPPGWHGMRLLYERAARLSRILFNMGIRVVETHPRSALKSSGCRSIYELAEKMSLPARTGLTRDEEDALIASIVAMEYAR
GEAVSFKAPDGEIFLLKPLCG

Specific function: Unknown

COG id: COG2410

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19888; Mature: 19888

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIYAGIDLAGSPRNPTGVALIKHNGRTRIVFIGVLYSDGEIIDLLGRFKPNIVALDAPL
CEEEEECEECCCCCCCCEEEEEEECCCEEEEEEEEEECCCCHHHHHHCCCCCEEEEECCC
TPGHGYREVDLLLLNNGYRVLPPGWHGMRLLYERAARLSRILFNMGIRVVETHPRSALKS
CCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHH
SGCRSIYELAEKMSLPARTGLTRDEEDALIASIVAMEYARGEAVSFKAPDGEIFLLKPLC
CCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCC
G
C
>Mature Secondary Structure
MVIYAGIDLAGSPRNPTGVALIKHNGRTRIVFIGVLYSDGEIIDLLGRFKPNIVALDAPL
CEEEEECEECCCCCCCCEEEEEEECCCEEEEEEEEEECCCCHHHHHHCCCCCEEEEECCC
TPGHGYREVDLLLLNNGYRVLPPGWHGMRLLYERAARLSRILFNMGIRVVETHPRSALKS
CCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHH
SGCRSIYELAEKMSLPARTGLTRDEEDALIASIVAMEYARGEAVSFKAPDGEIFLLKPLC
CCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA