Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883460

Identifier: 218883460

GI number: 218883460

Start: 133187

End: 133831

Strand: Reverse

Name: 218883460

Synonym: DKAM_0146

Alternate gene names: NA

Gene position: 133831-133187 (Counterclockwise)

Preceding gene: 218883463

Following gene: 218883459

Centisome position: 9.8

GC content: 44.96

Gene sequence:

>645_bases
TTGCAAAGGCGGCCACTGGTTATAGCCATATACGAGCCCAAGTGGTTTATACATGTACTCAGCGTTCTACGTGAGAGAAA
CATCTTTTTTGGCCATTATTATACCAGGGATGAAGTCCCATACGGTAGCATCCTATACACGGACTACTCACTGTTCTCTG
AGGAGGTAGCCGGTAGAAGCGATATACTCGTCTTCTATGACCCTACCCATGACTGCAGGATCTTAGAGAAGGCTATCCTA
GCCAGCTACTTGAAAGATATATATAATGAGCTAGTGGTCGGCGTGGATCCTGGTAGGCGAATAGGCTATATAGTGGTAGG
TGACGGCGAATACATAATACATGGAATAGGAGAATACATAGACTTAATCCATGTGGTCAACTACTTGAAGAAGTGCGTAC
CCGCTGAGAGAATAATCATAAGAGTCGGCTCAAGACACAGAGGCATTGAATTAGCGTCAATACTTAAAAAAGACACGGGG
GTGAAGGTGGAAGTTGTCAGTGAAGACGACACCACGCCTAGCTCCGTAAATATTGATGACGCTAGGTTACTGGGGTCAAG
GATAGGAAGGATAAAGCCGTTTAGAGAGAAAGACGTATATGCTGCCTACAAGATCGCCATGAAGAAGGGAATAGAGGTGG
TTTAA

Upstream 100 bases:

>100_bases
ATCAATTCATCAATATCCCTGTTACCAGTATAAAACTCTATAAAAATCACCTTCCAAGTATTCTATGTATTGAGAGGAGT
AATATTGGTGACTCATTGAT

Downstream 100 bases:

>100_bases
ACTGCCTCGTTTAAACCTCTCAAAGGGAGAGGCCGTCAGGGTATTCGGTCCTATGTCAATAAGCATCCTCAATGGGTCTA
TTACTATATTGGGGAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRSDILVFYDPTHDCRILEKAIL
ASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYIDLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTG
VKVEVVSEDDTTPSSVNIDDARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV

Sequences:

>Translated_214_residues
MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRSDILVFYDPTHDCRILEKAIL
ASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYIDLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTG
VKVEVVSEDDTTPSSVNIDDARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV
>Mature_214_residues
MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRSDILVFYDPTHDCRILEKAIL
ASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYIDLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTG
VKVEVVSEDDTTPSSVNIDDARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24481; Mature: 24481

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRS
CCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCC
DILVFYDPTHDCRILEKAILASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYI
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEHHHHHHH
DLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTGVKVEVVSEDDTTPSSVNIDD
HHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHH
ARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQRRPLVIAIYEPKWFIHVLSVLRERNIFFGHYYTRDEVPYGSILYTDYSLFSEEVAGRS
CCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCC
DILVFYDPTHDCRILEKAILASYLKDIYNELVVGVDPGRRIGYIVVGDGEYIIHGIGEYI
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEHHHHHHH
DLIHVVNYLKKCVPAERIIIRVGSRHRGIELASILKKDTGVKVEVVSEDDTTPSSVNIDD
HHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHH
ARLLGSRIGRIKPFREKDVYAAYKIAMKKGIEVV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA