Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883452

Identifier: 218883452

GI number: 218883452

Start: 126566

End: 127621

Strand: Direct

Name: 218883452

Synonym: DKAM_0138

Alternate gene names: NA

Gene position: 126566-127621 (Clockwise)

Preceding gene: 218883448

Following gene: 218883454

Centisome position: 9.27

GC content: 42.52

Gene sequence:

>1056_bases
ATGGAGAAAATAGTTATTCGTGCTGCAACTTTCTTCATTGGTAAAAGCAGTAACATTAGGGAGGAATACCAGCTCGGTGT
AGAGGTATTAGGCAGGATTAGTGAAATAGCTAAGGAATTGAACCTAGAGGTTTTCACAAAGCGTATCTCAATGCAGAGCT
TAAGCATGGATGAATTAGTGAAGCTCCCCGACATAGCTAGTGATAAGGATATACTAGTCAGCGCGGGCTATGTAAGTTTA
AGGAGGATAGGGGTCAGGGATGCTGAATATTTAACCAGTAATGGGGTTTACATTCCAGTTCTGCCATCTCTGGGGGATTT
CACGATTGATGATGCAAGGCATTTCTCTAGAATTATACATGGTGTAGCGGAGAAGGATCCCTTAAACGCTACGAGGATAG
CCATAGGTTTCCATAATGAGTCATTTCATACTCCTTATTTCCCTGACTCATCCAGCAGGGGTGTTAGGAGTATAGGCTTA
TCCTTTCTCTACCCAGATATGCTGGAAACTAATAATATCTCATCACTCTCCAACTCTATTCGCAACGCATTCAGGTTATT
CAATAATATAGCCCAGGTAATAGAGAATAATATCGGCTACCCCGTTTCAATAGATTACAGCCTATCTCCCTGGATGGAGA
AGAGTGTTGTTAAAATACTGGAGTCGCTGGGTTACAGCCTCCTAGAGCCCGGTGCCAACTATATTTTGCACGTAGTCAAC
AACCTTATACAGAAACACTATGATCCGCGTAGAGCAATAGGCTTCAACGAGGTGATGCTACCATACGCCGAGGATTCATT
ACTAATCAAATATGGGGGCATGGGCTTAATTAAGGCAAGGGATTTTCTACGCTATGCATCGACATGTGTTGCTGGAGTGG
ACATGATTATTGTTCCATCAGGCATTGAAAAACTAGCCAGGTTAGTAATGGACACCTACTCCCTTGGCTTGGTTAAATCG
AAACCTATAGCACTTAGAGCGATACCTGTGAACAATAAACCCGGTGAAAAAATAAGCCTTGGGAAATTCGGGGAACCCTT
TGTAATAGAGTATTGA

Upstream 100 bases:

>100_bases
AGGAAGTGTCTACCTTTAAGACTAGTCACCATGACTACCCACCTGTTTACACCGTTTTCTTAAATAGGAGGAACGTATTT
AAAGATAGCAGGGTGGATTT

Downstream 100 bases:

>100_bases
AACCGAGTATGTTTCCACATTGTTTTCAAGCCAATTAAGCCATCACATTTATAATGTGGTATTTCGAAGAATTCAAAGAC
GCGTGAAGTATTCACTAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MEKIVIRAATFFIGKSSNIREEYQLGVEVLGRISEIAKELNLEVFTKRISMQSLSMDELVKLPDIASDKDILVSAGYVSL
RRIGVRDAEYLTSNGVYIPVLPSLGDFTIDDARHFSRIIHGVAEKDPLNATRIAIGFHNESFHTPYFPDSSSRGVRSIGL
SFLYPDMLETNNISSLSNSIRNAFRLFNNIAQVIENNIGYPVSIDYSLSPWMEKSVVKILESLGYSLLEPGANYILHVVN
NLIQKHYDPRRAIGFNEVMLPYAEDSLLIKYGGMGLIKARDFLRYASTCVAGVDMIIVPSGIEKLARLVMDTYSLGLVKS
KPIALRAIPVNNKPGEKISLGKFGEPFVIEY

Sequences:

>Translated_351_residues
MEKIVIRAATFFIGKSSNIREEYQLGVEVLGRISEIAKELNLEVFTKRISMQSLSMDELVKLPDIASDKDILVSAGYVSL
RRIGVRDAEYLTSNGVYIPVLPSLGDFTIDDARHFSRIIHGVAEKDPLNATRIAIGFHNESFHTPYFPDSSSRGVRSIGL
SFLYPDMLETNNISSLSNSIRNAFRLFNNIAQVIENNIGYPVSIDYSLSPWMEKSVVKILESLGYSLLEPGANYILHVVN
NLIQKHYDPRRAIGFNEVMLPYAEDSLLIKYGGMGLIKARDFLRYASTCVAGVDMIIVPSGIEKLARLVMDTYSLGLVKS
KPIALRAIPVNNKPGEKISLGKFGEPFVIEY
>Mature_351_residues
MEKIVIRAATFFIGKSSNIREEYQLGVEVLGRISEIAKELNLEVFTKRISMQSLSMDELVKLPDIASDKDILVSAGYVSL
RRIGVRDAEYLTSNGVYIPVLPSLGDFTIDDARHFSRIIHGVAEKDPLNATRIAIGFHNESFHTPYFPDSSSRGVRSIGL
SFLYPDMLETNNISSLSNSIRNAFRLFNNIAQVIENNIGYPVSIDYSLSPWMEKSVVKILESLGYSLLEPGANYILHVVN
NLIQKHYDPRRAIGFNEVMLPYAEDSLLIKYGGMGLIKARDFLRYASTCVAGVDMIIVPSGIEKLARLVMDTYSLGLVKS
KPIALRAIPVNNKPGEKISLGKFGEPFVIEY

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007841 [H]

Pfam domain/function: PF05167 DUF711 [H]

EC number: NA

Molecular weight: Translated: 39147; Mature: 39147

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIVIRAATFFIGKSSNIREEYQLGVEVLGRISEIAKELNLEVFTKRISMQSLSMDELV
CCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KLPDIASDKDILVSAGYVSLRRIGVRDAEYLTSNGVYIPVLPSLGDFTIDDARHFSRIIH
CCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
GVAEKDPLNATRIAIGFHNESFHTPYFPDSSSRGVRSIGLSFLYPDMLETNNISSLSNSI
HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHH
RNAFRLFNNIAQVIENNIGYPVSIDYSLSPWMEKSVVKILESLGYSLLEPGANYILHVVN
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH
NLIQKHYDPRRAIGFNEVMLPYAEDSLLIKYGGMGLIKARDFLRYASTCVAGVDMIIVPS
HHHHHCCCCHHHCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECC
GIEKLARLVMDTYSLGLVKSKPIALRAIPVNNKPGEKISLGKFGEPFVIEY
HHHHHHHHHHHHHHHCCEECCCEEEEEEECCCCCCCEEECCCCCCCEEEEC
>Mature Secondary Structure
MEKIVIRAATFFIGKSSNIREEYQLGVEVLGRISEIAKELNLEVFTKRISMQSLSMDELV
CCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KLPDIASDKDILVSAGYVSLRRIGVRDAEYLTSNGVYIPVLPSLGDFTIDDARHFSRIIH
CCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
GVAEKDPLNATRIAIGFHNESFHTPYFPDSSSRGVRSIGLSFLYPDMLETNNISSLSNSI
HHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHH
RNAFRLFNNIAQVIENNIGYPVSIDYSLSPWMEKSVVKILESLGYSLLEPGANYILHVVN
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH
NLIQKHYDPRRAIGFNEVMLPYAEDSLLIKYGGMGLIKARDFLRYASTCVAGVDMIIVPS
HHHHHCCCCHHHCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECC
GIEKLARLVMDTYSLGLVKSKPIALRAIPVNNKPGEKISLGKFGEPFVIEY
HHHHHHHHHHHHHHHCCEECCCEEEEEEECCCCCCCEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]