Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883448

Identifier: 218883448

GI number: 218883448

Start: 121676

End: 122392

Strand: Direct

Name: 218883448

Synonym: DKAM_0134

Alternate gene names: NA

Gene position: 121676-122392 (Clockwise)

Preceding gene: 218883446

Following gene: 218883452

Centisome position: 8.91

GC content: 43.93

Gene sequence:

>717_bases
ATGAGGGCTCTCACTCTAATGGTGGGTGTCTTGAGTAGTAGTGAAAACCATGAATCACCGGGCGTCGAGAAGAAGCCTAA
TTGGCTACTCTTAAAGGAGTCGGCTGAGGAATTATATAGGGCTGGAAAGATATATTTTACACGTAAGGAGCTTGTTGATA
AGGCAAGGGAGAAGGATCCCTCAAGGTCTGAGATGAGCTTGGATTTCGAAATAGATCTTGTCACAGTTAACAGTAGTAGT
AAGGATAGATATAAGGACCCCGAGAAACTATTCCTCTACAGGGTTGATAGGGGAAGATATACGCTTTACAGTCCTGAGGA
ACATGGCGAGCTAGAGAAGTATATTGGGATAAAGAAGGTCTCTCCAGCTAGAAAACACTTAATTGAGGAAGTAGTTAGTG
AACTAGAAAAAATGGGGTATGATGCATCGGAGAACAGGTATGCTAAACCGCTCCAGCCAGATATAGTTGCTGAGAAGGGA
GATGAGGTGGTTGGGGTATGGGTGATAGATCCAGGTACGCCTTTATCAGACCAGTATAAGATGCTTGCATACGCGATTGG
CTCCAGCCTACTCAACAGGGAATACAGTGAATACATAGTAGTTGTTCCAGGCGAGCTCTTGAAGAGGGTTACGAAGGACT
TGATTGATACGCTGGACCGGTTTAAAATACGCTTTGCTACTGTTAGAGAAGAGAGAAGATATACCCTGCAATTATAG

Upstream 100 bases:

>100_bases
TGGCAAAAATTATACAATAATATAATAATAGCAGAAGAACAGCATCAAACAATATAAACCAACATCAACAACTATAAACA
TATAAAAACAAAAACAATTC

Downstream 100 bases:

>100_bases
TGGTTGTCCATCTTTTTTAAGCATGCCTAAACTGTTAACTCGTTCTCAAGTTTCTTCTTCATAACTTCCCTAGCCTCTTC
CAGTATTCTTTTTACATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDPSRSEMSLDFEIDLVTVNSSS
KDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKVSPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKG
DEVVGVWVIDPGTPLSDQYKMLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL

Sequences:

>Translated_238_residues
MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDPSRSEMSLDFEIDLVTVNSSS
KDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKVSPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKG
DEVVGVWVIDPGTPLSDQYKMLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL
>Mature_238_residues
MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDPSRSEMSLDFEIDLVTVNSSS
KDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKVSPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKG
DEVVGVWVIDPGTPLSDQYKMLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27531; Mature: 27531

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDP
CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHCCC
SRSEMSLDFEIDLVTVNSSSKDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKV
CCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCHHHHHCCCCC
SPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKGDEVVGVWVIDPGTPLSDQYK
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCHHHH
MLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL
HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDP
CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHCCC
SRSEMSLDFEIDLVTVNSSSKDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKV
CCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCHHHHHCCCCC
SPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKGDEVVGVWVIDPGTPLSDQYK
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCHHHH
MLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL
HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA