| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883448
Identifier: 218883448
GI number: 218883448
Start: 121676
End: 122392
Strand: Direct
Name: 218883448
Synonym: DKAM_0134
Alternate gene names: NA
Gene position: 121676-122392 (Clockwise)
Preceding gene: 218883446
Following gene: 218883452
Centisome position: 8.91
GC content: 43.93
Gene sequence:
>717_bases ATGAGGGCTCTCACTCTAATGGTGGGTGTCTTGAGTAGTAGTGAAAACCATGAATCACCGGGCGTCGAGAAGAAGCCTAA TTGGCTACTCTTAAAGGAGTCGGCTGAGGAATTATATAGGGCTGGAAAGATATATTTTACACGTAAGGAGCTTGTTGATA AGGCAAGGGAGAAGGATCCCTCAAGGTCTGAGATGAGCTTGGATTTCGAAATAGATCTTGTCACAGTTAACAGTAGTAGT AAGGATAGATATAAGGACCCCGAGAAACTATTCCTCTACAGGGTTGATAGGGGAAGATATACGCTTTACAGTCCTGAGGA ACATGGCGAGCTAGAGAAGTATATTGGGATAAAGAAGGTCTCTCCAGCTAGAAAACACTTAATTGAGGAAGTAGTTAGTG AACTAGAAAAAATGGGGTATGATGCATCGGAGAACAGGTATGCTAAACCGCTCCAGCCAGATATAGTTGCTGAGAAGGGA GATGAGGTGGTTGGGGTATGGGTGATAGATCCAGGTACGCCTTTATCAGACCAGTATAAGATGCTTGCATACGCGATTGG CTCCAGCCTACTCAACAGGGAATACAGTGAATACATAGTAGTTGTTCCAGGCGAGCTCTTGAAGAGGGTTACGAAGGACT TGATTGATACGCTGGACCGGTTTAAAATACGCTTTGCTACTGTTAGAGAAGAGAGAAGATATACCCTGCAATTATAG
Upstream 100 bases:
>100_bases TGGCAAAAATTATACAATAATATAATAATAGCAGAAGAACAGCATCAAACAATATAAACCAACATCAACAACTATAAACA TATAAAAACAAAAACAATTC
Downstream 100 bases:
>100_bases TGGTTGTCCATCTTTTTTAAGCATGCCTAAACTGTTAACTCGTTCTCAAGTTTCTTCTTCATAACTTCCCTAGCCTCTTC CAGTATTCTTTTTACATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDPSRSEMSLDFEIDLVTVNSSS KDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKVSPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKG DEVVGVWVIDPGTPLSDQYKMLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL
Sequences:
>Translated_238_residues MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDPSRSEMSLDFEIDLVTVNSSS KDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKVSPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKG DEVVGVWVIDPGTPLSDQYKMLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL >Mature_238_residues MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDPSRSEMSLDFEIDLVTVNSSS KDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKVSPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKG DEVVGVWVIDPGTPLSDQYKMLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27531; Mature: 27531
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDP CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHCCC SRSEMSLDFEIDLVTVNSSSKDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKV CCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCHHHHHCCCCC SPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKGDEVVGVWVIDPGTPLSDQYK CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCHHHH MLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure MRALTLMVGVLSSSENHESPGVEKKPNWLLLKESAEELYRAGKIYFTRKELVDKAREKDP CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHCCC SRSEMSLDFEIDLVTVNSSSKDRYKDPEKLFLYRVDRGRYTLYSPEEHGELEKYIGIKKV CCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCHHHHHCCCCC SPARKHLIEEVVSELEKMGYDASENRYAKPLQPDIVAEKGDEVVGVWVIDPGTPLSDQYK CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCHHHH MLAYAIGSSLLNREYSEYIVVVPGELLKRVTKDLIDTLDRFKIRFATVREERRYTLQL HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA