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The map label for this gene is 218883357

Identifier: 218883357

GI number: 218883357

Start: 40502

End: 41284

Strand: Direct

Name: 218883357

Synonym: DKAM_0043

Alternate gene names: NA

Gene position: 40502-41284 (Clockwise)

Preceding gene: 218883354

Following gene: 218883359

Centisome position: 2.97

GC content: 45.21

Gene sequence:

>783_bases
GTGTTGAAGAATAATATAGTAACGGCGATCATTATGGTGGAGAGAGTTAAAACAGGGATACCTGGCTTGGATGACATCCT
TAATGGGGGCATACCAAAGAGAAATATAGTGCTATTAAGCGGGGGACCGGGTACAGGGAAAACAATACTTGCTTCACAAT
TCCTCTGGAATGGACTACAACTCGGTGAGCCAGGCATATATGTTGCACTCGAGGAGCATCCTGTTCAGGTACGCATCAAC
ATGAAGAATTTTGGATGGGATGTCCGCCAATACGAGCAGGAGGGCAAGTTCGCTGTGATAGATGCCTTTACCGGTGGGGT
TGGTGAAGCAGCTAAGCGGGAGAAATATGTAGTGAAGGATACTGATAGCGTTGAGGAGTTGATCGATGTATTGAGGACAG
CAATCAGGGAGATTAATGCCCAGAGAGTCGTGGTTGACAGTGTTTCAACATTATATCTGTTAAAGCCCTCAATAGCCAGA
AACGTGGTGCTTCAATTAAAGAAAGTATTATCTGGAATGGGGACCACAAGCCTTCTCGTTTCACAGGTATCAGTGACAGA
GAGGGGATTCGGGGGTCCGGGTGTTGAGCACGCGGCTGATGGAATAGTGAGACTAGACCTTGATGAAATAGATGGAGAAC
TAGTTAGGAGCATAATAGTTTGGAAGATGCGTGGAACAAGTCACAGTATGAAGAGACATATAATGGAGATAACGGATAAA
GGCGTAGTCGTATACCCTGATAAAGTGTTGAAGACGCGTAGATACATTGCAATACAGGAGTAG

Upstream 100 bases:

>100_bases
CTTAGCTTAATCCCTTTTTCGCTTCTCTTCTGACTACTCATCTTGAATCCCTGATTATAATATAATTTTATATCTCAACA
GCTATTAAAACAATATATAA

Downstream 100 bases:

>100_bases
AGCAAGCCCCCACCGTGTTCCAAGTATTACCCGGTAGTACCAATGATGAGTCATCATCTACTTCCAAGGTAGCGAATAGA
AAGTATTCAGAAGCAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLKNNIVTAIIMVERVKTGIPGLDDILNGGIPKRNIVLLSGGPGTGKTILASQFLWNGLQLGEPGIYVALEEHPVQVRIN
MKNFGWDVRQYEQEGKFAVIDAFTGGVGEAAKREKYVVKDTDSVEELIDVLRTAIREINAQRVVVDSVSTLYLLKPSIAR
NVVLQLKKVLSGMGTTSLLVSQVSVTERGFGGPGVEHAADGIVRLDLDEIDGELVRSIIVWKMRGTSHSMKRHIMEITDK
GVVVYPDKVLKTRRYIAIQE

Sequences:

>Translated_260_residues
MLKNNIVTAIIMVERVKTGIPGLDDILNGGIPKRNIVLLSGGPGTGKTILASQFLWNGLQLGEPGIYVALEEHPVQVRIN
MKNFGWDVRQYEQEGKFAVIDAFTGGVGEAAKREKYVVKDTDSVEELIDVLRTAIREINAQRVVVDSVSTLYLLKPSIAR
NVVLQLKKVLSGMGTTSLLVSQVSVTERGFGGPGVEHAADGIVRLDLDEIDGELVRSIIVWKMRGTSHSMKRHIMEITDK
GVVVYPDKVLKTRRYIAIQE
>Mature_260_residues
MLKNNIVTAIIMVERVKTGIPGLDDILNGGIPKRNIVLLSGGPGTGKTILASQFLWNGLQLGEPGIYVALEEHPVQVRIN
MKNFGWDVRQYEQEGKFAVIDAFTGGVGEAAKREKYVVKDTDSVEELIDVLRTAIREINAQRVVVDSVSTLYLLKPSIAR
NVVLQLKKVLSGMGTTSLLVSQVSVTERGFGGPGVEHAADGIVRLDLDEIDGELVRSIIVWKMRGTSHSMKRHIMEITDK
GVVVYPDKVLKTRRYIAIQE

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 28646; Mature: 28646

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNNIVTAIIMVERVKTGIPGLDDILNGGIPKRNIVLLSGGPGTGKTILASQFLWNGLQ
CCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEE
LGEPGIYVALEEHPVQVRINMKNFGWDVRQYEQEGKFAVIDAFTGGVGEAAKREKYVVKD
ECCCCEEEEEECCCEEEEEEEHHCCCHHHHHHHCCCEEEEEECCCCCCCHHHCCCEEECC
TDSVEELIDVLRTAIREINAQRVVVDSVSTLYLLKPSIARNVVLQLKKVLSGMGTTSLLV
CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHH
SQVSVTERGFGGPGVEHAADGIVRLDLDEIDGELVRSIIVWKMRGTSHSMKRHIMEITDK
HHHHHHHCCCCCCCHHHHHCCEEEEEHHHCCHHHHHHHHHEEECCCHHHHHHHHHHHCCC
GVVVYPDKVLKTRRYIAIQE
CEEEECHHHHHCCCEEEECC
>Mature Secondary Structure
MLKNNIVTAIIMVERVKTGIPGLDDILNGGIPKRNIVLLSGGPGTGKTILASQFLWNGLQ
CCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEE
LGEPGIYVALEEHPVQVRINMKNFGWDVRQYEQEGKFAVIDAFTGGVGEAAKREKYVVKD
ECCCCEEEEEECCCEEEEEEEHHCCCHHHHHHHCCCEEEEEECCCCCCCHHHCCCEEECC
TDSVEELIDVLRTAIREINAQRVVVDSVSTLYLLKPSIARNVVLQLKKVLSGMGTTSLLV
CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHH
SQVSVTERGFGGPGVEHAADGIVRLDLDEIDGELVRSIIVWKMRGTSHSMKRHIMEITDK
HHHHHHHCCCCCCCHHHHHCCEEEEEHHHCCHHHHHHHHHEEECCCHHHHHHHHHHHCCC
GVVVYPDKVLKTRRYIAIQE
CEEEECHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]