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The map label for this gene is ubiX [C]

Identifier: 218883359

GI number: 218883359

Start: 42362

End: 42949

Strand: Direct

Name: ubiX [C]

Synonym: DKAM_0045

Alternate gene names: 218883359

Gene position: 42362-42949 (Clockwise)

Preceding gene: 218883357

Following gene: 218883363

Centisome position: 3.1

GC content: 41.5

Gene sequence:

>588_bases
ATGGTGGGCTCCTCACTTATTATCGCCTTAACTGGGGCAAGCGGTATCTCGTACGGGTTGAGTCTGCTTAAGAAAATAAA
TGTGTTTAAAAACAAGTATAGCGAGGTCTACGTGGTTTACACCTTTAACGCTGTTAAAGTGGCTTTATATGAGGAAGGCA
TAGATCTTTTGGAGTTTCTCAAGGGCTTAAATGGTGTTAAGGCAGTTTACCCTGAAAATGATTTTTCATCGGAGCTAGCC
AGCAGTAGTAATCTAGTGTTTACAGACATGGTTATAGTGCCTGCCTCGATGAACACGATTGCCAAGATAGCTAATGGTAT
CCAAGATAATCTAGTCACGAGAACAGCTAGTGCAGTATTGCGTTTAAGGAATAAACTAGTGTTAGTCTTTAGGGAAACCC
CGCTTTCCAGCATAGATTTATTCAACCTATATAGGCTGGCAACGGCTGGCGCGGTAGTAATGCCTGCCTCACCAGGCTTT
TATATTAAGCCTAAAAGTATAGAGGATACCATCGATTTCATAGTTGGGAAGATACTCGACGCATTACATGTAGAGCATAA
TCTCTATAAGAGATGGGGCATTAGTTAA

Upstream 100 bases:

>100_bases
TGAGTTAACTTAATAAGCATGAACCACGTAATCAACATAATTAGATGATAGGGCTCGAAAGGTCTGAGTATGTGATGACC
CCGCGCAGGATTGATGAATA

Downstream 100 bases:

>100_bases
CCCTTAAAAAAGCCAAGGCAGTTTCAACCTCTATGATATCCGTTCACTCGTTGACATTAGATTATTTAGCGTTCAAGGAG
GGCATTTTTTAACCAGTCTT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVGSSLIIALTGASGISYGLSLLKKINVFKNKYSEVYVVYTFNAVKVALYEEGIDLLEFLKGLNGVKAVYPENDFSSELA
SSSNLVFTDMVIVPASMNTIAKIANGIQDNLVTRTASAVLRLRNKLVLVFRETPLSSIDLFNLYRLATAGAVVMPASPGF
YIKPKSIEDTIDFIVGKILDALHVEHNLYKRWGIS

Sequences:

>Translated_195_residues
MVGSSLIIALTGASGISYGLSLLKKINVFKNKYSEVYVVYTFNAVKVALYEEGIDLLEFLKGLNGVKAVYPENDFSSELA
SSSNLVFTDMVIVPASMNTIAKIANGIQDNLVTRTASAVLRLRNKLVLVFRETPLSSIDLFNLYRLATAGAVVMPASPGF
YIKPKSIEDTIDFIVGKILDALHVEHNLYKRWGIS
>Mature_195_residues
MVGSSLIIALTGASGISYGLSLLKKINVFKNKYSEVYVVYTFNAVKVALYEEGIDLLEFLKGLNGVKAVYPENDFSSELA
SSSNLVFTDMVIVPASMNTIAKIANGIQDNLVTRTASAVLRLRNKLVLVFRETPLSSIDLFNLYRLATAGAVVMPASPGF
YIKPKSIEDTIDFIVGKILDALHVEHNLYKRWGIS

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=34.3915343915344, Blast_Score=100, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6320746, Length=190, Percent_Identity=34.2105263157895, Blast_Score=113, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.- [C]

Molecular weight: Translated: 21371; Mature: 21371

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSSLIIALTGASGISYGLSLLKKINVFKNKYSEVYVVYTFNAVKVALYEEGIDLLEFL
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEEHHCCHHHHHHH
KGLNGVKAVYPENDFSSELASSSNLVFTDMVIVPASMNTIAKIANGIQDNLVTRTASAVL
HCCCCCEEECCCCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHH
RLRNKLVLVFRETPLSSIDLFNLYRLATAGAVVMPASPGFYIKPKSIEDTIDFIVGKILD
HHHCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEECCCCHHHHHHHHHHHHHH
ALHVEHNLYKRWGIS
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MVGSSLIIALTGASGISYGLSLLKKINVFKNKYSEVYVVYTFNAVKVALYEEGIDLLEFL
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEEHHCCHHHHHHH
KGLNGVKAVYPENDFSSELASSSNLVFTDMVIVPASMNTIAKIANGIQDNLVTRTASAVL
HCCCCCEEECCCCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHH
RLRNKLVLVFRETPLSSIDLFNLYRLATAGAVVMPASPGFYIKPKSIEDTIDFIVGKILD
HHHCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEECCCCHHHHHHHHHHHHHH
ALHVEHNLYKRWGIS
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]