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The map label for this gene is 218883354

Identifier: 218883354

GI number: 218883354

Start: 34911

End: 35699

Strand: Direct

Name: 218883354

Synonym: DKAM_0040

Alternate gene names: NA

Gene position: 34911-35699 (Clockwise)

Preceding gene: 218883352

Following gene: 218883357

Centisome position: 2.56

GC content: 45.12

Gene sequence:

>789_bases
ATGGGGAGAATACCCTCTGGGATACCAGGGCTAGACGAGCTCATAGAGGGGGGTATACCAAGGGGTTTCATGGTTGCTCT
TGTAGGTGAACCAGGTACCGGTAAGACAGCTATGTCGATACAGTTCATATCAAAGGGGCTGCTGGAAGGCGATAAGGCCA
TATATGTTACAACAGAGGAGTCTAGGGAGAGCATTATTTCCCAGTCTAAACGGTTTGGAGTTGATCTAAAACCATATATT
GATGAGGGAAAGCTAGTTGTGATAGACGCGTTAATGGGTGAATACGGGGATCTATGGAGTCTTAAAGAACTAGACGTAGA
TGAATTAATCTCTATCATCATCGAGGCAAAGAAGTACCTCGGTCCAGGCCATGCTAGATTAGTCATAGACTCTATGAGTG
CATTCTGGCTTGAGAAGCCGGTCATGGCTAGGAAATACAGTTACCAGGTTAAACGGGTTTTGAGTAAATGGGGATTCACA
ATACTTGCTACAAGCCAATACGCGGTAACAACTCAACTGGGCTTTGGCTTCGGCATCGAGCATGTTGCCGATGGAGTAAT
AAGGCTCCGTAAAAGCGTTGTAAAAGGAGTTCTCAAACGTTTCCTAGTCATCGAGAAGATGAGGCAGACTAATCATGATC
AACATGTGTTCGAAGTAGAGATAGTGGATGGCTTAGGAGTCCGAATAGCTGGACCCGTGAAGGCCTCTAGATGGGATTTA
GTACTCCCACCAGATGTAGTAGCGAGAATTATTGAGAGCGGCTTTGATAAATTAGAGTATGAGGGTTAA

Upstream 100 bases:

>100_bases
CAACCCCCACCGATTTCCTGCCTAACTATTTAACAATGATTATAATCCTGTTTAAACTTATGAATTATTACGATATGTAA
GGGTTGATGTCTTCTTGAAC

Downstream 100 bases:

>100_bases
ATATTGGACTCATGGAATTCATACATATAATCCCGTACACCGGGCACGTATTTATCTGGCTCTAAGCTAGTCAAGTAGTT
AAAGTATATACAGGCTATCT

Product: putative circadian clock protein, KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MGRIPSGIPGLDELIEGGIPRGFMVALVGEPGTGKTAMSIQFISKGLLEGDKAIYVTTEESRESIISQSKRFGVDLKPYI
DEGKLVVIDALMGEYGDLWSLKELDVDELISIIIEAKKYLGPGHARLVIDSMSAFWLEKPVMARKYSYQVKRVLSKWGFT
ILATSQYAVTTQLGFGFGIEHVADGVIRLRKSVVKGVLKRFLVIEKMRQTNHDQHVFEVEIVDGLGVRIAGPVKASRWDL
VLPPDVVARIIESGFDKLEYEG

Sequences:

>Translated_262_residues
MGRIPSGIPGLDELIEGGIPRGFMVALVGEPGTGKTAMSIQFISKGLLEGDKAIYVTTEESRESIISQSKRFGVDLKPYI
DEGKLVVIDALMGEYGDLWSLKELDVDELISIIIEAKKYLGPGHARLVIDSMSAFWLEKPVMARKYSYQVKRVLSKWGFT
ILATSQYAVTTQLGFGFGIEHVADGVIRLRKSVVKGVLKRFLVIEKMRQTNHDQHVFEVEIVDGLGVRIAGPVKASRWDL
VLPPDVVARIIESGFDKLEYEG
>Mature_261_residues
GRIPSGIPGLDELIEGGIPRGFMVALVGEPGTGKTAMSIQFISKGLLEGDKAIYVTTEESRESIISQSKRFGVDLKPYID
EGKLVVIDALMGEYGDLWSLKELDVDELISIIIEAKKYLGPGHARLVIDSMSAFWLEKPVMARKYSYQVKRVLSKWGFTI
LATSQYAVTTQLGFGFGIEHVADGVIRLRKSVVKGVLKRFLVIEKMRQTNHDQHVFEVEIVDGLGVRIAGPVKASRWDLV
LPPDVVARIIESGFDKLEYEG

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR020588
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 29025; Mature: 28894

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIPSGIPGLDELIEGGIPRGFMVALVGEPGTGKTAMSIQFISKGLLEGDKAIYVTTEE
CCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECH
SRESIISQSKRFGVDLKPYIDEGKLVVIDALMGEYGDLWSLKELDVDELISIIIEAKKYL
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GPGHARLVIDSMSAFWLEKPVMARKYSYQVKRVLSKWGFTILATSQYAVTTQLGFGFGIE
CCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCHH
HVADGVIRLRKSVVKGVLKRFLVIEKMRQTNHDQHVFEVEIVDGLGVRIAGPVKASRWDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCE
VLPPDVVARIIESGFDKLEYEG
ECCHHHHHHHHHHCHHHHCCCC
>Mature Secondary Structure 
GRIPSGIPGLDELIEGGIPRGFMVALVGEPGTGKTAMSIQFISKGLLEGDKAIYVTTEE
CCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECH
SRESIISQSKRFGVDLKPYIDEGKLVVIDALMGEYGDLWSLKELDVDELISIIIEAKKYL
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GPGHARLVIDSMSAFWLEKPVMARKYSYQVKRVLSKWGFTILATSQYAVTTQLGFGFGIE
CCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCHH
HVADGVIRLRKSVVKGVLKRFLVIEKMRQTNHDQHVFEVEIVDGLGVRIAGPVKASRWDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCE
VLPPDVVARIIESGFDKLEYEG
ECCHHHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]