| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883341
Identifier: 218883341
GI number: 218883341
Start: 26289
End: 26921
Strand: Direct
Name: 218883341
Synonym: DKAM_0027
Alternate gene names: NA
Gene position: 26289-26921 (Clockwise)
Preceding gene: 218883340
Following gene: 218883342
Centisome position: 1.93
GC content: 42.81
Gene sequence:
>633_bases ATGATTCCCAGTGGATGTAGTAAGCCAATTGTTGTAATAGAGCACTTGGAAGATGGATTGAGTCCATGGATACTCCTCGA ATACAGGCATCTCTCTGGTTTCTACGGCTCGAACTGTGTAGTCTTCGCAAATATCCCTGGGAAATACCATAGAATATTGG GCAGGTATGGGATACCGGTTAAGGAGAGCATTATTGAGATCGTTAACAGCGGCATCATCAAGCCCGGCGAGGTGATAATA CTTGATCCAGCCAGTCCCAGGGAGCTAACCTATGAAATCCTATCTAGAACCAAGTACGTGGTAGTTGGAGGTATACTAGG AGATCACCCGCCTAAGAAGAGGACCCGGGAGCTTATAAGTAGCAGACTTAAATTAATTGAATCCTATAACATAGGGGATG GGCAATACAGTATAGATGGGGCAGTCTACTACATATACTACATGCACTCAAATAAGGGAATGAACGGCTATAAATACGTG GATGGAGTATCAATCAGAGATGGTGATAGAATAATTCATTTACCATTCAGATACCCGCTGGTAGAGGAGAAGCCGTTTAT ATCGAGTGATCTAATCTATTATATCCTTAATAGAAGAATACCCGATCACGTCTGGGAAGAGATAAAGGGTTGA
Upstream 100 bases:
>100_bases AAAGGATGCACTTGTATCTCAGGGGACTGCTTTCTTTTTACACAGCATGGTTATCAACCGTCTTCATATTATACGATTTG ATCCCGGTGAAGTCATCACC
Downstream 100 bases:
>100_bases AATACTATAGGGGAAATCCCGCCGGGGGGATTTGAACCCCCGGCCACCCGGTGTCTATGCCCTCACTACAGCCGGGCGCT CTGCCGCTGAGCTACGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPVKESIIEIVNSGIIKPGEVII LDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELISSRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYV DGVSIRDGDRIIHLPFRYPLVEEKPFISSDLIYYILNRRIPDHVWEEIKG
Sequences:
>Translated_210_residues MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPVKESIIEIVNSGIIKPGEVII LDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELISSRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYV DGVSIRDGDRIIHLPFRYPLVEEKPFISSDLIYYILNRRIPDHVWEEIKG >Mature_210_residues MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPVKESIIEIVNSGIIKPGEVII LDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELISSRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYV DGVSIRDGDRIIHLPFRYPLVEEKPFISSDLIYYILNRRIPDHVWEEIKG
Specific function: Unknown
COG id: COG2428
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324595, Length=198, Percent_Identity=29.2929292929293, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23957; Mature: 23957
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPV CCCCCCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCH KESIIEIVNSGIIKPGEVIILDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELIS HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH SRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYVDGVSIRDGDRIIHLPFRYPL HHHHHHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCEEECCCEEECCCEEEEECCCCCC VEEKPFISSDLIYYILNRRIPDHVWEEIKG CCCCCCCCHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MIPSGCSKPIVVIEHLEDGLSPWILLEYRHLSGFYGSNCVVFANIPGKYHRILGRYGIPV CCCCCCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCH KESIIEIVNSGIIKPGEVIILDPASPRELTYEILSRTKYVVVGGILGDHPPKKRTRELIS HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH SRLKLIESYNIGDGQYSIDGAVYYIYYMHSNKGMNGYKYVDGVSIRDGDRIIHLPFRYPL HHHHHHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCEEECCCEEECCCEEEEECCCCCC VEEKPFISSDLIYYILNRRIPDHVWEEIKG CCCCCCCCHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA