Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883319

Identifier: 218883319

GI number: 218883319

Start: 2457

End: 3470

Strand: Reverse

Name: 218883319

Synonym: DKAM_0005

Alternate gene names: NA

Gene position: 3470-2457 (Counterclockwise)

Preceding gene: 218883320

Following gene: 218883317

Centisome position: 0.25

GC content: 43.59

Gene sequence:

>1014_bases
ATGGCTAAGACGGTTGTAAGAGGGGCGGGGGACTCACCAACCATTAAAAAATATATTGATAAATCCCCGCTTGAAGAACT
TGTTCGGAGAGCATTAAACAGAGAAGCCCCCGTTGCTAACATATTAATTAAAGCCTTGAGCCCCAATGCATTTATTGATT
CGCTTTCACCAAGTGGTAGCATAGGGTTTAAATCAATCCCGGTAATCACAGTGTCCCAGGGCTTCTACAGGGTTCGAAGC
ACTGGTGGAGTATTTGATGTAGGTGTAGAGGATTCTGGGGATGGCGTTATAGTTGTAGGGTATATAGAGCTGATCTTAGA
GGGTTCAGGTCTCACGATTCTAAGAATACCGGAGAATCCCGTACATAGAATCATGGGTATAAAGGTAACTGTGGTTAAAG
GAGTTGATCACGAGGTACTCTTGATTCATAAATCAGGTAAGAGGGCAGTGGATCTCAGCGAAATCATAGTTGAGCAAGGG
GATGCAAGTAGGCTAGCCCTCGTAGCATTATTCAACACTGGCTCTATACTACAAGCCAGGGTGGAATCCATTCAGGGTGC
TGGCTCATCAATAGAGAAGACTATACTGGTTAACTCTACACAGGGATCACGTGTAGAGGTAGAGGATTACTCATATATAG
ATAATCCTAGTGTAAGCGTGGAGTCATATATAAGGTCTAGGCTGGAAGGGGGCTCTATAGCTGTTCTACGTGGCAGAGGC
ATGGCCTCCAGAAGGGCATCTGGCTCTAGAATAGTGTATGGCATTGAGTCATTGATTAATGATGCTGAGAGTACAGCGTT
CATGCATCCATTTCTAGATATACATTCCAATAATATAGTGGAAGCCAGACATTACGCTAGAAACTATTTGTTAACCATGG
ATAAATTATTCTATATCGAGACAAGAGGACTGAAACCAGATGAGGCGGCCATGTTACTGGTACACGGCTTCCTAACAAGA
GGACTGAGTAGAGCTGCGAGAGAAATTATTCTAAGCAATATCAGCTCTTCTTGA

Upstream 100 bases:

>100_bases
GATTTGTTAAGGATATTTTTCCAAAGCTACCATTCGAGTATGCATCGATGTTGACGAAGGTTATACAGTTAGAATTCAAG
GAGATCGGGGGGGTTGGATA

Downstream 100 bases:

>100_bases
AAACATATATTATTCTATTATTCTCAACGGTTTTAACACTTACTTTATAACCATATCTATTGCCAAGTAGTTGAGCCAAA
CCCTGGGGTATTATCTCGGG

Product: ABC transporter, membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MAKTVVRGAGDSPTIKKYIDKSPLEELVRRALNREAPVANILIKALSPNAFIDSLSPSGSIGFKSIPVITVSQGFYRVRS
TGGVFDVGVEDSGDGVIVVGYIELILEGSGLTILRIPENPVHRIMGIKVTVVKGVDHEVLLIHKSGKRAVDLSEIIVEQG
DASRLALVALFNTGSILQARVESIQGAGSSIEKTILVNSTQGSRVEVEDYSYIDNPSVSVESYIRSRLEGGSIAVLRGRG
MASRRASGSRIVYGIESLINDAESTAFMHPFLDIHSNNIVEARHYARNYLLTMDKLFYIETRGLKPDEAAMLLVHGFLTR
GLSRAAREIILSNISSS

Sequences:

>Translated_337_residues
MAKTVVRGAGDSPTIKKYIDKSPLEELVRRALNREAPVANILIKALSPNAFIDSLSPSGSIGFKSIPVITVSQGFYRVRS
TGGVFDVGVEDSGDGVIVVGYIELILEGSGLTILRIPENPVHRIMGIKVTVVKGVDHEVLLIHKSGKRAVDLSEIIVEQG
DASRLALVALFNTGSILQARVESIQGAGSSIEKTILVNSTQGSRVEVEDYSYIDNPSVSVESYIRSRLEGGSIAVLRGRG
MASRRASGSRIVYGIESLINDAESTAFMHPFLDIHSNNIVEARHYARNYLLTMDKLFYIETRGLKPDEAAMLLVHGFLTR
GLSRAAREIILSNISSS
>Mature_336_residues
AKTVVRGAGDSPTIKKYIDKSPLEELVRRALNREAPVANILIKALSPNAFIDSLSPSGSIGFKSIPVITVSQGFYRVRST
GGVFDVGVEDSGDGVIVVGYIELILEGSGLTILRIPENPVHRIMGIKVTVVKGVDHEVLLIHKSGKRAVDLSEIIVEQGD
ASRLALVALFNTGSILQARVESIQGAGSSIEKTILVNSTQGSRVEVEDYSYIDNPSVSVESYIRSRLEGGSIAVLRGRGM
ASRRASGSRIVYGIESLINDAESTAFMHPFLDIHSNNIVEARHYARNYLLTMDKLFYIETRGLKPDEAAMLLVHGFLTRG
LSRAAREIILSNISSS

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36506; Mature: 36375

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTVVRGAGDSPTIKKYIDKSPLEELVRRALNREAPVANILIKALSPNAFIDSLSPSGS
CCCCEEECCCCCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEECCCCCCC
IGFKSIPVITVSQGFYRVRSTGGVFDVGVEDSGDGVIVVGYIELILEGSGLTILRIPENP
CCCCCCCEEEECCCEEEEECCCCEEEECCCCCCCCEEEEEEEEEEECCCCEEEEECCCCH
VHRIMGIKVTVVKGVDHEVLLIHKSGKRAVDLSEIIVEQGDASRLALVALFNTGSILQAR
HHHHEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEECCCHHHHHH
VESIQGAGSSIEKTILVNSTQGSRVEVEDYSYIDNPSVSVESYIRSRLEGGSIAVLRGRG
HHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCC
MASRRASGSRIVYGIESLINDAESTAFMHPFLDIHSNNIVEARHYARNYLLTMDKLFYIE
CCCCCCCCCEEEEEHHHHHCCHHHHEECCHHHEECCCCEEHHHHHHHHHHEEEEEEEEEE
TRGLKPDEAAMLLVHGFLTRGLSRAAREIILSNISSS
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKTVVRGAGDSPTIKKYIDKSPLEELVRRALNREAPVANILIKALSPNAFIDSLSPSGS
CCCEEECCCCCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEECCCCCCC
IGFKSIPVITVSQGFYRVRSTGGVFDVGVEDSGDGVIVVGYIELILEGSGLTILRIPENP
CCCCCCCEEEECCCEEEEECCCCEEEECCCCCCCCEEEEEEEEEEECCCCEEEEECCCCH
VHRIMGIKVTVVKGVDHEVLLIHKSGKRAVDLSEIIVEQGDASRLALVALFNTGSILQAR
HHHHEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEECCCHHHHHH
VESIQGAGSSIEKTILVNSTQGSRVEVEDYSYIDNPSVSVESYIRSRLEGGSIAVLRGRG
HHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCC
MASRRASGSRIVYGIESLINDAESTAFMHPFLDIHSNNIVEARHYARNYLLTMDKLFYIE
CCCCCCCCCEEEEEHHHHHCCHHHHEECCHHHEECCCCEEHHHHHHHHHHEEEEEEEEEE
TRGLKPDEAAMLLVHGFLTRGLSRAAREIILSNISSS
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA