| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is mnmG
Identifier: 218711034
GI number: 218711034
Start: 3297294
End: 3299189
Strand: Reverse
Name: mnmG
Synonym: VS_3163
Alternate gene names: 218711034
Gene position: 3299189-3297294 (Counterclockwise)
Preceding gene: NA
Following gene: 218711033
Centisome position: 100.0
GC content: 46.68
Gene sequence:
>1896_bases ATGCTTTATCACGAAAAATTTGACGTCATCGTTGTTGGTGGTGGCCATGCAGGAACGGAAGCCGCACTCGCATCTGCACG TACTGGTCAAAGTACGTTATTACTAACTCATAATATCGATACGTTGGGACAGATGTCTTGTAACCCAGCCATTGGCGGGA TCGGTAAGGGCCACTTGGTAAAAGAGGTCGATGCTATGGGTGGATTAATGGCGCAAGCTATTGATCATGCAGGTATTCAG TTCAGAACATTAAACGCATCAAAAGGCCCTGCGGTACGTGCAACTCGTGCACAAGCTGACCGCGCACTTTACAAAGCCTT TGTCCGTAATGTTCTTGAAAACACACCAAACCTAACTCTGTTCCAACAGTCGGTTGATGACTTGATCGTTGAACAAGATC AAGTGGTGGGTGTGGTTACGCAAATGGGCCTCAAATTCCGCGCTAATGCTGTGGTCTTAACGGTAGGCACATTCCTAGGC GGTAAGATTCATATTGGTATGGAAAGTTCATCGGGTGGACGTGCGGGTGATCCACCATCGATCGCGCTCGCTGACCGTCT TCGTGATCTTCCATTTCGTGTTGATCGCCTGAAAACGGGTACACCTCCTCGCATCGATGCACGCAGCGTTGATTTTTCTG AGCTTGAGGTTCAACACGGCGATAATCCGACTCCGGTTTTCTCATTCATGGGGAACCGAGCTCAGCAGCCGCGTCAGATT CCATGTTACATCACGCACACTAACGAAAATACGCATGACGTTATTCGTGCCAACCTCGATCGCAGCCCGATGTACGCTGG TGTGATTGAAGGTATTGGCCCTCGTTACTGTCCGTCGATTGAAGACAAAGTGATGCGCTTTGCTGATAAAAACAGTCACC AAATTTTCATTGAGCCTGAAGGCCTAACGACGCACGAGTTATACCCGAATGGTATTTCAACCAGTTTACCGTTTGATGTT CAGGTAAAAATCGTTCACTCAATGAAAGGTTTTGAGAACGCACACATCGTCCGTCCTGGCTACGCGATTGAGTACGACTT CTTTGACCCTCGCGATCTTAAACTGACTTACGAGACCAAGTTTATTAAGGGGTTGTTCTTTGCGGGGCAAATCAATGGCA CCACTGGCTACGAAGAAGCTGCAGCACAAGGCTTAATGGCCGGTTTGAATGCGAGTTTGTTTACGCAAGGCAAAGAGGGC TGGAGCCCACGCCGCGATCAAGCTTACATGGGTGTACTTATCGATGACTTGTCGACGATGGGTACTAAAGAACCGTACCG AATGTTTACATCTCGCGCGGAGTACCGCTTGTTGCTTCGTGAAGACAACGCTGATATCCGTTTGACTGAAAAGTCACGTG AACTTGGCTTGGTCGACGATGCTCGTTGGACGCGATTCAACGAGAAGATGGAAAACATGGAGAAAGAGCGTCAACGTCTT AAAGAAACATGGATTAATCCAAAATCTGAAGATATTGATCAATTGAACCAGATCCTGAAAACACCAATGTCTCGTGAAGC GAGTGGTGAAGATCTTCTTCGTCGTCCTGAAATGACTTATTCACAGCTAACGTCGTTGGATCGTTTTGGTCCTGCACTGG AAGATCAACAAGCGTCTGAGCAAGTTGAGATCCAAGTGAAGTACGATGGCTATATCCAACGTCAACAAGATGAAATTGAA AAATCACTGCGTCATGAAAACACCAAACTGCCGGCTGACATCGATTACAGTAAGGTAAAAGGGCTTTCTAACGAAGTGGT TCTTAAACTAACTACCGCTAAACCAGACTCAATTGGTATTGCATCGCGAATCTCAGGTATCACACCTGCTGCAATTTCAA TTCTGTTGGTTTACTTGAAAAAACACGGCCTGTTGAAAAAAGGTGAGGAAGCATAA
Upstream 100 bases:
>100_bases TTTCGAAAAATTCCAAAAACGTTTTCTCAAGCTATGAAAACAGGTAGAATATCGCTCCTTTTTATCAATCTAGAAACGTT TGAGTACCTGAGGTCGGTTC
Downstream 100 bases:
>100_bases TGAGCGCATTACGCGAAAAACTGGATCACCTGATTGGCCAGACTGAACTTGAAGTATCTGAAAAGCAACGCAGCCAATTG GTTGGCTACGTTGAGTTACT
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 631; Mature: 631
Protein sequence:
>631_residues MLYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAMGGLMAQAIDHAGIQ FRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLFQQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLG GKIHIGMESSSGGRAGDPPSIALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGNRAQQPRQI PCYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTHELYPNGISTSLPFDV QVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKFIKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEG WSPRRDQAYMGVLIDDLSTMGTKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRL KETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQASEQVEIQVKYDGYIQRQQDEIE KSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGIASRISGITPAAISILLVYLKKHGLLKKGEEA
Sequences:
>Translated_631_residues MLYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAMGGLMAQAIDHAGIQ FRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLFQQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLG GKIHIGMESSSGGRAGDPPSIALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGNRAQQPRQI PCYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTHELYPNGISTSLPFDV QVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKFIKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEG WSPRRDQAYMGVLIDDLSTMGTKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRL KETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQASEQVEIQVKYDGYIQRQQDEIE KSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGIASRISGITPAAISILLVYLKKHGLLKKGEEA >Mature_631_residues MLYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAMGGLMAQAIDHAGIQ FRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTLFQQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLG GKIHIGMESSSGGRAGDPPSIALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGNRAQQPRQI PCYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTHELYPNGISTSLPFDV QVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETKFIKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEG WSPRRDQAYMGVLIDDLSTMGTKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRL KETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQASEQVEIQVKYDGYIQRQQDEIE KSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGIASRISGITPAAISILLVYLKKHGLLKKGEEA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=631, Percent_Identity=45.4833597464342, Blast_Score=503, Evalue=1e-142, Organism=Homo sapiens, GI19882217, Length=656, Percent_Identity=43.75, Blast_Score=489, Evalue=1e-138, Organism=Homo sapiens, GI183227703, Length=671, Percent_Identity=42.7719821162444, Blast_Score=484, Evalue=1e-136, Organism=Escherichia coli, GI2367273, Length=627, Percent_Identity=77.6714513556619, Blast_Score=1030, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=628, Percent_Identity=40.7643312101911, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321202, Length=623, Percent_Identity=43.8202247191011, Blast_Score=493, Evalue=1e-140, Organism=Drosophila melanogaster, GI24658174, Length=636, Percent_Identity=47.4842767295598, Blast_Score=537, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_VIBSL (B7VN07)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002418655.1 - ProteinModelPortal: B7VN07 - GeneID: 7162601 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_3163 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 70187; Mature: 70187
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 125-125 BINDING 180-180 BINDING 370-370
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLV CCEECEEEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHH KEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTL HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE FQQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPS EHHHHHHHHHCCHHHHHHHHHCCCEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCC IALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGNRAQQPRQI HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHCCCCCCCCCC PCYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPE CEEEEECCCCCHHHHEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECC GLTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETK CCEEEEECCCCCCCCCCCEEEEEEEEHHCCCCCCEEECCCEEEEECCCCCCCCEEEEEHH FIKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTM EEEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHC GTKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQASE HHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC QVEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGI EEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCH ASRISGITPAAISILLVYLKKHGLLKKGEEA HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLYHEKFDVIVVGGGHAGTEAALASARTGQSTLLLTHNIDTLGQMSCNPAIGGIGKGHLV CCEECEEEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHH KEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAFVRNVLENTPNLTL HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE FQQSVDDLIVEQDQVVGVVTQMGLKFRANAVVLTVGTFLGGKIHIGMESSSGGRAGDPPS EHHHHHHHHHCCHHHHHHHHHCCCEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCC IALADRLRDLPFRVDRLKTGTPPRIDARSVDFSELEVQHGDNPTPVFSFMGNRAQQPRQI HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHCCCCCCCCCC PCYITHTNENTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPE CEEEEECCCCCHHHHEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECC GLTTHELYPNGISTSLPFDVQVKIVHSMKGFENAHIVRPGYAIEYDFFDPRDLKLTYETK CCEEEEECCCCCCCCCCCEEEEEEEEHHCCCCCCEEECCCEEEEECCCCCCCCEEEEEHH FIKGLFFAGQINGTTGYEEAAAQGLMAGLNASLFTQGKEGWSPRRDQAYMGVLIDDLSTM EEEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHC GTKEPYRMFTSRAEYRLLLREDNADIRLTEKSRELGLVDDARWTRFNEKMENMEKERQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KETWINPKSEDIDQLNQILKTPMSREASGEDLLRRPEMTYSQLTSLDRFGPALEDQQASE HHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC QVEIQVKYDGYIQRQQDEIEKSLRHENTKLPADIDYSKVKGLSNEVVLKLTTAKPDSIGI EEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCH ASRISGITPAAISILLVYLKKHGLLKKGEEA HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA