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The map label for this gene is 218710874

Identifier: 218710874

GI number: 218710874

Start: 3116810

End: 3117403

Strand: Direct

Name: 218710874

Synonym: VS_2958

Alternate gene names: NA

Gene position: 3116810-3117403 (Clockwise)

Preceding gene: 218710873

Following gene: 218710877

Centisome position: 94.47

GC content: 46.97

Gene sequence:

>594_bases
ATGTCCTCATCGTTACTCAAAGAGATTCGACAATGCCGAGCTTGTGAGCCTCACCTATCACACGGTGCTAACCCGGTAAT
TCAAGCGCATCCAAACGCGCGCTTGCTTATCATTGGGCAGGCGCCTGGTATTAAGGTTCATGAGTCATCGATCCCTTGGA
ATGATGCCAGTGGCGAACGATTAAGAGAATGGTTAGGGATAGATAGCGATACGTTTTATGACGAACAAAAAGTCGCGATT
GTTCCTATGGGGTTTTGTTATCCGGGAAAGGGAAAGAGTGGCGATCTCCCACCACGTAAAGAGTGTGCGGAGCTTTGGCA
TAACAAAGTGCTGCAATCGCTACCCAACATTCAAATGACACTGCTGATTGGCCAGTATGCGCAAAACTATTATCTAAAAG
ATAAAGCCACCAGCACACTCACTGAAACGGTACGTAACTGGCAGGCTTGGGCTCCAGAATTTTTGCCACTTCCCCACCCT
TCACCACGTAATAATATCTGGCTCAAGAAAAACCCATGGTTCGAAAGTGAAGTCATTCCCTATATCAGGAAGCACGTATC
AGAGCATTTGGCCTGCCATGATCCAAATGCCTAA

Upstream 100 bases:

>100_bases
GTGAGCCAAGGCAGGTGGTAAAGATCTTCGCCGAGAATTACCAACAATGGCGAGATGGCTTTAAACTGAACCATGTCATC
GATTTTGATAAAGGTTACTG

Downstream 100 bases:

>100_bases
TTAGCTGCACATCAACGATGATTTAGCCGATATTGAGTGTGGATAGAAAGATAATAAAAAAGCGCTGCCGATTTCTCGAC
AGCGCTTTTTCTAAAAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSSSLLKEIRQCRACEPHLSHGANPVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGERLREWLGIDSDTFYDEQKVAI
VPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLLIGQYAQNYYLKDKATSTLTETVRNWQAWAPEFLPLPHP
SPRNNIWLKKNPWFESEVIPYIRKHVSEHLACHDPNA

Sequences:

>Translated_197_residues
MSSSLLKEIRQCRACEPHLSHGANPVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGERLREWLGIDSDTFYDEQKVAI
VPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLLIGQYAQNYYLKDKATSTLTETVRNWQAWAPEFLPLPHP
SPRNNIWLKKNPWFESEVIPYIRKHVSEHLACHDPNA
>Mature_196_residues
SSSLLKEIRQCRACEPHLSHGANPVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGERLREWLGIDSDTFYDEQKVAIV
PMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMTLLIGQYAQNYYLKDKATSTLTETVRNWQAWAPEFLPLPHPS
PRNNIWLKKNPWFESEVIPYIRKHVSEHLACHDPNA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22423; Mature: 22292

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLLKEIRQCRACEPHLSHGANPVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGER
CCHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCCCHHH
LREWLGIDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMT
HHHHHCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LLIGQYAQNYYLKDKATSTLTETVRNWQAWAPEFLPLPHPSPRNNIWLKKNPWFESEVIP
EEEHHHHHCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHH
YIRKHVSEHLACHDPNA
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSSLLKEIRQCRACEPHLSHGANPVIQAHPNARLLIIGQAPGIKVHESSIPWNDASGER
CHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCCCHHH
LREWLGIDSDTFYDEQKVAIVPMGFCYPGKGKSGDLPPRKECAELWHNKVLQSLPNIQMT
HHHHHCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LLIGQYAQNYYLKDKATSTLTETVRNWQAWAPEFLPLPHPSPRNNIWLKKNPWFESEVIP
EEEHHHHHCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHH
YIRKHVSEHLACHDPNA
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]