| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is acsA [H]
Identifier: 218710858
GI number: 218710858
Start: 3100422
End: 3102371
Strand: Direct
Name: acsA [H]
Synonym: VS_2942
Alternate gene names: 218710858
Gene position: 3100422-3102371 (Clockwise)
Preceding gene: 218710857
Following gene: 218710859
Centisome position: 93.97
GC content: 48.1
Gene sequence:
>1950_bases ATGAGTGAAGCCCACGTTTATCCGGTAAAAGAAAATATTAAATCAACCACACACGCGGATAATGACACTTACCTAGCCAT GTACCAGCAATCTGTTTCTGACCCTGAAGGCTTTTGGGGTGAACACGGAAAAATCGTTGATTGGATTAAACCTTTCACAC AGGTAAAAAATACCTCTTTCGACCCTGGCCACATTGATATTCGCTGGTTTGAAGATGGCACGCTTAACGTTTCGGCTAAC TGTATCGACCGCCACCTTGCTGAACGCGGCGATGAAGTCGCTATTATCTGGGAAGGCGATGACCCGGCGGATGACAAAAC TCTAACTTTTAATGAACTACACAAAGAAGTGTGCCTGTTTTCGAATGCTCTGAAAGAGCAAGGCGTGCGCAAAGGCGATG TGGTTTGTTTATACATGCCAATGGTTCCTGAAGCTGCAGTAGCCATGCTGGCGTGTACCCGTATAGGTGCGGTTCACACA GTAGTATTTGGTGGTTTCTCACCAGAAGCACTGTCTGGTCGTATTATCGATTCAAATTCTAAAGTCGTTATCACTGCCGA TGAAGGCGTGCGTGGCGGCCGTGCTGTTCCACTGAAGAAAAATGTCGATGAAGCACTGACGAATCCTGAAGTGAAGAACA TCGAAAAGGTTGTAGTATTCAAACGTACTGGCGGCGATGTTGCATGGCACGAACACCGCGATGTGTGGTGGCACGATGCT ATTGCTAATGTATCTGCAGATTGTCCTCCAGAAGAGATGAACGCAGAAGACCCACTATTCATCCTTTATACGTCAGGTTC AACAGGCAAACCTAAGGGTGTTATGCACACCACAGGTGGTTACCTTGTTTATGCAGCAATGACCTTCAAATACGTATTCG ATTACCAAGAAGGCGAAACTTTCTGGTGTACAGCCGATGTGGGTTGGATTACCGGTCACACATACCTTGTTTACGGGCCA CTAGCCAATGGTGCAAAAACCATTCTGTTTGAAGGCGTGCCGAACTACCCGAACACAAGCCGCATGAGTGAAGTGGTCGA TAAGCACCAAGTTAATATTCTTTATACGGCGCCAACAGCTATTCGTGCATTGATGGCGAAAGGCAATGAAGCCGTTGAAG GCACGTCTCGTGACAGCCTAAGAATCATGGGCTCAGTGGGTGAACCTATCAACCCAGAGGCGTGGGAGTGGTACTACAAA ACAATCGGTAATGAGCAGTCTCCAATTGTTGATACATGGTGGCAAACAGAAACGGGTGGTATCTTAATCGCACCACTACC GGGGGCAACCGATCTAAAACCGGGCTCAGCGACGCGTCCATTCTTCGGTGTGCAACCGGCGCTGGTTGATAACATGGGTA ACATCATTGAGGGTGCAACAGACGGCAACCTAGTGATTCTTGACTCTTGGCCAGGCCAGATGCGTACCGTTCACGGCGAT CATGACCGTTTCGAACAAACTTACTTCTCGACCTTTAAAGGCATGTACTTCACCAGTGATGGTGCTCGTCGTGATGAAGA CGGTTACTACTGGATTACTGGCCGTGTTGATGACGTTCTGAACGTATCAGGCCACCGTATGGGTACCGCTGAGATTGAAT CGGCTCTAGTCGCATTTGATAAGATCGCAGAGGCTGCGATTGTAGGTATCCCTCATGATATTAAAGGCCAAGCGATTTAC GCTTACATCACGTTGAATGATGGTGAATTTCCGACCGCAGAGCTTCATAAAGAAGTGAAAGACTGGGTACGCAAAGAGAT AGGCCCAATCGCAACGCCAGATGTACTGCACTGGACCGACTCATTACCAAAAACTCGTTCAGGTAAAATCATGCGTCGTA TCCTGCGTAAGATTGCCACTGGCGATACTGGCAACCTAGGCGATACGTCGACACTGGCAGACCCAAGCGTGGTCGATAAG CTGATTGCAGAGAAAGCGGAACTGGCATAA
Upstream 100 bases:
>100_bases TCGAGAGTGATAACACAAAGATGGTTCTGTAATAGACCTAGAAACTGAACACAAAGGAAGTTGCCAGTTCATTAGGAATG TAGGCACAAGGAGAGATGCA
Downstream 100 bases:
>100_bases GCAACCCGTCACATTACGTAATTACTGTTTAAAACAGCGCCTTTCTAAACCGTCACCTATGTGGCGGTTTTTTTATGGCT GATCTTGATCTCAAATATCC
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MSEAHVYPVKENIKSTTHADNDTYLAMYQQSVSDPEGFWGEHGKIVDWIKPFTQVKNTSFDPGHIDIRWFEDGTLNVSAN CIDRHLAERGDEVAIIWEGDDPADDKTLTFNELHKEVCLFSNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHT VVFGGFSPEALSGRIIDSNSKVVITADEGVRGGRAVPLKKNVDEALTNPEVKNIEKVVVFKRTGGDVAWHEHRDVWWHDA IANVSADCPPEEMNAEDPLFILYTSGSTGKPKGVMHTTGGYLVYAAMTFKYVFDYQEGETFWCTADVGWITGHTYLVYGP LANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAVEGTSRDSLRIMGSVGEPINPEAWEWYYK TIGNEQSPIVDTWWQTETGGILIAPLPGATDLKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVILDSWPGQMRTVHGD HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAFDKIAEAAIVGIPHDIKGQAIY AYITLNDGEFPTAELHKEVKDWVRKEIGPIATPDVLHWTDSLPKTRSGKIMRRILRKIATGDTGNLGDTSTLADPSVVDK LIAEKAELA
Sequences:
>Translated_649_residues MSEAHVYPVKENIKSTTHADNDTYLAMYQQSVSDPEGFWGEHGKIVDWIKPFTQVKNTSFDPGHIDIRWFEDGTLNVSAN CIDRHLAERGDEVAIIWEGDDPADDKTLTFNELHKEVCLFSNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHT VVFGGFSPEALSGRIIDSNSKVVITADEGVRGGRAVPLKKNVDEALTNPEVKNIEKVVVFKRTGGDVAWHEHRDVWWHDA IANVSADCPPEEMNAEDPLFILYTSGSTGKPKGVMHTTGGYLVYAAMTFKYVFDYQEGETFWCTADVGWITGHTYLVYGP LANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAVEGTSRDSLRIMGSVGEPINPEAWEWYYK TIGNEQSPIVDTWWQTETGGILIAPLPGATDLKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVILDSWPGQMRTVHGD HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAFDKIAEAAIVGIPHDIKGQAIY AYITLNDGEFPTAELHKEVKDWVRKEIGPIATPDVLHWTDSLPKTRSGKIMRRILRKIATGDTGNLGDTSTLADPSVVDK LIAEKAELA >Mature_648_residues SEAHVYPVKENIKSTTHADNDTYLAMYQQSVSDPEGFWGEHGKIVDWIKPFTQVKNTSFDPGHIDIRWFEDGTLNVSANC IDRHLAERGDEVAIIWEGDDPADDKTLTFNELHKEVCLFSNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHTV VFGGFSPEALSGRIIDSNSKVVITADEGVRGGRAVPLKKNVDEALTNPEVKNIEKVVVFKRTGGDVAWHEHRDVWWHDAI ANVSADCPPEEMNAEDPLFILYTSGSTGKPKGVMHTTGGYLVYAAMTFKYVFDYQEGETFWCTADVGWITGHTYLVYGPL ANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAVEGTSRDSLRIMGSVGEPINPEAWEWYYKT IGNEQSPIVDTWWQTETGGILIAPLPGATDLKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVILDSWPGQMRTVHGDH DRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAFDKIAEAAIVGIPHDIKGQAIYA YITLNDGEFPTAELHKEVKDWVRKEIGPIATPDVLHWTDSLPKTRSGKIMRRILRKIATGDTGNLGDTSTLADPSVVDKL IAEKAELA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=669, Percent_Identity=50.8221225710015, Blast_Score=689, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=682, Percent_Identity=49.8533724340176, Blast_Score=684, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=625, Percent_Identity=49.28, Blast_Score=629, Evalue=1e-180, Organism=Homo sapiens, GI13375727, Length=635, Percent_Identity=36.3779527559055, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI42544132, Length=541, Percent_Identity=27.3567467652495, Blast_Score=183, Evalue=5e-46, Organism=Homo sapiens, GI31982927, Length=649, Percent_Identity=24.4992295839753, Blast_Score=183, Evalue=5e-46, Organism=Homo sapiens, GI38505220, Length=516, Percent_Identity=29.6511627906977, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI122937307, Length=551, Percent_Identity=25.7713248638838, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI115511026, Length=545, Percent_Identity=26.605504587156, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI58082049, Length=530, Percent_Identity=24.1509433962264, Blast_Score=143, Evalue=5e-34, Organism=Homo sapiens, GI157311624, Length=530, Percent_Identity=23.3962264150943, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI157311622, Length=530, Percent_Identity=23.3962264150943, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI187761345, Length=403, Percent_Identity=25.5583126550869, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI187761343, Length=403, Percent_Identity=25.5583126550869, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI42544134, Length=359, Percent_Identity=24.5125348189415, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI195947378, Length=404, Percent_Identity=25.2475247524752, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI156151445, Length=391, Percent_Identity=24.5524296675192, Blast_Score=81, Evalue=3e-15, Organism=Escherichia coli, GI1790505, Length=649, Percent_Identity=73.6517719568567, Blast_Score=1035, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=631, Percent_Identity=35.6576862123613, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI1788107, Length=587, Percent_Identity=23.679727427598, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI221142682, Length=532, Percent_Identity=21.8045112781955, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI145693145, Length=125, Percent_Identity=32, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71983001, Length=643, Percent_Identity=50.3888024883359, Blast_Score=641, Evalue=0.0, Organism=Caenorhabditis elegans, GI71982997, Length=642, Percent_Identity=50.4672897196262, Blast_Score=640, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=604, Percent_Identity=22.1854304635762, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17559526, Length=576, Percent_Identity=23.7847222222222, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17538037, Length=582, Percent_Identity=23.5395189003436, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17557194, Length=576, Percent_Identity=22.5694444444444, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17558820, Length=520, Percent_Identity=21.9230769230769, Blast_Score=90, Evalue=4e-18, Organism=Caenorhabditis elegans, GI32563687, Length=519, Percent_Identity=22.7360308285164, Blast_Score=86, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323182, Length=640, Percent_Identity=47.65625, Blast_Score=619, Evalue=1e-178, Organism=Saccharomyces cerevisiae, GI6319264, Length=635, Percent_Identity=47.0866141732283, Blast_Score=585, Evalue=1e-168, Organism=Saccharomyces cerevisiae, GI6319699, Length=370, Percent_Identity=23.7837837837838, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24667955, Length=664, Percent_Identity=51.6566265060241, Blast_Score=682, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=562, Percent_Identity=55.8718861209964, Blast_Score=637, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=520, Percent_Identity=56.3461538461538, Blast_Score=596, Evalue=1e-170, Organism=Drosophila melanogaster, GI21355225, Length=635, Percent_Identity=34.8031496062992, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI18859661, Length=548, Percent_Identity=24.8175182481752, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24656500, Length=538, Percent_Identity=23.7918215613383, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24581924, Length=530, Percent_Identity=20.9433962264151, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71625; Mature: 71494
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAHVYPVKENIKSTTHADNDTYLAMYQQSVSDPEGFWGEHGKIVDWIKPFTQVKNTSF CCCCEEEEHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC DPGHIDIRWFEDGTLNVSANCIDRHLAERGDEVAIIWEGDDPADDKTLTFNELHKEVCLF CCCEEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHH SNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHTVVFGGFSPEALSGRIIDSNS HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCHHCCCEEEECCC KVVITADEGVRGGRAVPLKKNVDEALTNPEVKNIEKVVVFKRTGGDVAWHEHRDVWWHDA EEEEECCCCCCCCEECCCCCCHHHHHCCCCHHCCEEEEEEEECCCCCEEECCCCCCHHHH IANVSADCPPEEMNAEDPLFILYTSGSTGKPKGVMHTTGGYLVYAAMTFKYVFDYQEGET HHCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEEEEEEEEEECCCCE FWCTADVGWITGHTYLVYGPLANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTA EEEEECCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAKGNEAVEGTSRDSLRIMGSVGEPINPEAWEWYYKTIGNEQSPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECEECCCCC ILIAPLPGATDLKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVILDSWPGQMRTVHGD EEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCEEEEECCCCCEEEECCC HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAFD HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH KIAEAAIVGIPHDIKGQAIYAYITLNDGEFPTAELHKEVKDWVRKEIGPIATPDVLHWTD HHHHHEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCC SLPKTRSGKIMRRILRKIATGDTGNLGDTSTLADPSVVDKLIAEKAELA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SEAHVYPVKENIKSTTHADNDTYLAMYQQSVSDPEGFWGEHGKIVDWIKPFTQVKNTSF CCCEEEEHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC DPGHIDIRWFEDGTLNVSANCIDRHLAERGDEVAIIWEGDDPADDKTLTFNELHKEVCLF CCCEEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHH SNALKEQGVRKGDVVCLYMPMVPEAAVAMLACTRIGAVHTVVFGGFSPEALSGRIIDSNS HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCHHCCCEEEECCC KVVITADEGVRGGRAVPLKKNVDEALTNPEVKNIEKVVVFKRTGGDVAWHEHRDVWWHDA EEEEECCCCCCCCEECCCCCCHHHHHCCCCHHCCEEEEEEEECCCCCEEECCCCCCHHHH IANVSADCPPEEMNAEDPLFILYTSGSTGKPKGVMHTTGGYLVYAAMTFKYVFDYQEGET HHCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEEEEEEEEEECCCCE FWCTADVGWITGHTYLVYGPLANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTA EEEEECCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAKGNEAVEGTSRDSLRIMGSVGEPINPEAWEWYYKTIGNEQSPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECEECCCCC ILIAPLPGATDLKPGSATRPFFGVQPALVDNMGNIIEGATDGNLVILDSWPGQMRTVHGD EEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCEEEEECCCCCEEEECCC HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAFD HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH KIAEAAIVGIPHDIKGQAIYAYITLNDGEFPTAELHKEVKDWVRKEIGPIATPDVLHWTD HHHHHEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCC SLPKTRSGKIMRRILRKIATGDTGNLGDTSTLADPSVVDKLIAEKAELA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]