Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710710

Identifier: 218710710

GI number: 218710710

Start: 2958267

End: 2958809

Strand: Direct

Name: 218710710

Synonym: VS_2793

Alternate gene names: NA

Gene position: 2958267-2958809 (Clockwise)

Preceding gene: 218710709

Following gene: 218710711

Centisome position: 89.66

GC content: 47.15

Gene sequence:

>543_bases
ATGAACCCCATAGCCCAACCGAGCGCCCTAACTTCTTTCTCTCCTAGTATCAAGGGAGCGGTAGAGATATTGAATCAGGG
TTTAGAGTTTTTGTTAGTGATATCTGACAGCGACTATCTGACACGAGCAAAGCCGCACGTCACAAGTTCTATTGGTGAGC
ATACCCGTCACACGCTCGATCTTTTTCACGCTTTGATTTTAAAAGAGAATGCGACCGTTGATTACAACACTCGTCGTCGT
GGTCACCCCGTCGAATTCGACAGGTCGATTGCGTTGAAAGAGATCCATTACGTGATCAATTGGCTTGAACGATTAGACCG
TAGAGATCTCGAAGCACCTATCATGATCCAAACCGAAGTTTCGATGGATACACAAGTATTCGCCAGCCTGCCTTCTACGC
TAGAAAGAGAAGTCACCTTTGCCGCGCTGCACGCCAATCATCATTACGCGATGATCAAGGTGATCACGACCTTTCTTGAT
GTCGAAACGTGCAACACCTTTGGTTATGCCCCAACCACCAGCAGCTATTTGAGGGAGCAATAA

Upstream 100 bases:

>100_bases
CAGTCTCCTTCTTTTAAGAGCTTATATAACGCGTGGCAAGAAGAGCGACGTCTTGTTCAACAATATCCGACCACCGATTA
ACTTTGTACGAGGATCATGA

Downstream 100 bases:

>100_bases
TCATGTGTTCAGTATCTTGGCTGCTTGAAGACAATGGCTATCAGGTCTTCTTTAATCGTGATGAACAAAAGACACGGGCA
CTGGCGATGCCACCTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNPIAQPSALTSFSPSIKGAVEILNQGLEFLLVISDSDYLTRAKPHVTSSIGEHTRHTLDLFHALILKENATVDYNTRRR
GHPVEFDRSIALKEIHYVINWLERLDRRDLEAPIMIQTEVSMDTQVFASLPSTLEREVTFAALHANHHYAMIKVITTFLD
VETCNTFGYAPTTSSYLREQ

Sequences:

>Translated_180_residues
MNPIAQPSALTSFSPSIKGAVEILNQGLEFLLVISDSDYLTRAKPHVTSSIGEHTRHTLDLFHALILKENATVDYNTRRR
GHPVEFDRSIALKEIHYVINWLERLDRRDLEAPIMIQTEVSMDTQVFASLPSTLEREVTFAALHANHHYAMIKVITTFLD
VETCNTFGYAPTTSSYLREQ
>Mature_180_residues
MNPIAQPSALTSFSPSIKGAVEILNQGLEFLLVISDSDYLTRAKPHVTSSIGEHTRHTLDLFHALILKENATVDYNTRRR
GHPVEFDRSIALKEIHYVINWLERLDRRDLEAPIMIQTEVSMDTQVFASLPSTLEREVTFAALHANHHYAMIKVITTFLD
VETCNTFGYAPTTSSYLREQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20442; Mature: 20442

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIAQPSALTSFSPSIKGAVEILNQGLEFLLVISDSDYLTRAKPHVTSSIGEHTRHTLD
CCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHH
LFHALILKENATVDYNTRRRGHPVEFDRSIALKEIHYVINWLERLDRRDLEAPIMIQTEV
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
SMDTQVFASLPSTLEREVTFAALHANHHYAMIKVITTFLDVETCNTFGYAPTTSSYLREQ
CCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MNPIAQPSALTSFSPSIKGAVEILNQGLEFLLVISDSDYLTRAKPHVTSSIGEHTRHTLD
CCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHH
LFHALILKENATVDYNTRRRGHPVEFDRSIALKEIHYVINWLERLDRRDLEAPIMIQTEV
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
SMDTQVFASLPSTLEREVTFAALHANHHYAMIKVITTFLDVETCNTFGYAPTTSSYLREQ
CCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA