| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710711
Identifier: 218710711
GI number: 218710711
Start: 2958812
End: 2959561
Strand: Direct
Name: 218710711
Synonym: VS_2794
Alternate gene names: NA
Gene position: 2958812-2959561 (Clockwise)
Preceding gene: 218710710
Following gene: 218710712
Centisome position: 89.68
GC content: 45.87
Gene sequence:
>750_bases ATGTGTTCAGTATCTTGGCTGCTTGAAGACAATGGCTATCAGGTCTTCTTTAATCGTGATGAACAAAAGACACGGGCACT GGCGATGCCACCTAAACAATATCGAGTTAACGGCGTCGATATCATCATGCCACTCGACCCAACCGGCGGTGGTAGCTGGA TCAGTATCAATGAGTTCGGGCTTTCGTTATGCCTACTCAATAACTATCAAGGCATCGTACCTGATGGACTTTTAGTCAGC CGTGGTTTGTTACTCAAGAACCTATCATCGAGTCGTAATATCAGTCAGCTCTCTGAAGCATTTCATAAGCTCGATCTGCA CTCTTTTGCCCCATTTACCTTGCTAGCTTTCGCGCCCAACTTAACTCAACACCATGGCTTGGTTATCGCCTATATGTGGG ATGGCATTCAACAAAAAATAGTCGAAACCGACTCTCCGCTGTTCTCATCCGGTGTTGATTTAGAGCGAGTGCAAGCCTAC CGACAAGCAAAATACGATCAGCTTATGGCAACGGGTAAGAATCAACAGAACTTACTTCAATTTCACTCTCACCATCACAG CGAACAGCCTCATTTAGCGACCTGCATGCATCGTGAAGACGCGCACACAGTGAGCTTTACACACTTACGCAATCTACACG GCCAAGCCTCTATGTTTTACGTACCCGGCTCGCCTTGTGAACCCATTAAACCATGCCAGATAAATCAACAGCGTTTTACC TTCGATTTATCACCAGCAATCAATCTATAG
Upstream 100 bases:
>100_bases ACGCGATGATCAAGGTGATCACGACCTTTCTTGATGTCGAAACGTGCAACACCTTTGGTTATGCCCCAACCACCAGCAGC TATTTGAGGGAGCAATAATC
Downstream 100 bases:
>100_bases ATGGAGTCCATCATGAGAAAACTATTAACCATGGTCATGCTACTTGTTAGCCCTTACGTATTTGCCGCCGATGAAATCTA CACCGGATTCTTTAGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MCSVSWLLEDNGYQVFFNRDEQKTRALAMPPKQYRVNGVDIIMPLDPTGGGSWISINEFGLSLCLLNNYQGIVPDGLLVS RGLLLKNLSSSRNISQLSEAFHKLDLHSFAPFTLLAFAPNLTQHHGLVIAYMWDGIQQKIVETDSPLFSSGVDLERVQAY RQAKYDQLMATGKNQQNLLQFHSHHHSEQPHLATCMHREDAHTVSFTHLRNLHGQASMFYVPGSPCEPIKPCQINQQRFT FDLSPAINL
Sequences:
>Translated_249_residues MCSVSWLLEDNGYQVFFNRDEQKTRALAMPPKQYRVNGVDIIMPLDPTGGGSWISINEFGLSLCLLNNYQGIVPDGLLVS RGLLLKNLSSSRNISQLSEAFHKLDLHSFAPFTLLAFAPNLTQHHGLVIAYMWDGIQQKIVETDSPLFSSGVDLERVQAY RQAKYDQLMATGKNQQNLLQFHSHHHSEQPHLATCMHREDAHTVSFTHLRNLHGQASMFYVPGSPCEPIKPCQINQQRFT FDLSPAINL >Mature_249_residues MCSVSWLLEDNGYQVFFNRDEQKTRALAMPPKQYRVNGVDIIMPLDPTGGGSWISINEFGLSLCLLNNYQGIVPDGLLVS RGLLLKNLSSSRNISQLSEAFHKLDLHSFAPFTLLAFAPNLTQHHGLVIAYMWDGIQQKIVETDSPLFSSGVDLERVQAY RQAKYDQLMATGKNQQNLLQFHSHHHSEQPHLATCMHREDAHTVSFTHLRNLHGQASMFYVPGSPCEPIKPCQINQQRFT FDLSPAINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28117; Mature: 28117
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSVSWLLEDNGYQVFFNRDEQKTRALAMPPKQYRVNGVDIIMPLDPTGGGSWISINEFG CCCEEEEEECCCEEEEEECCCHHHHEECCCCHHEEECCEEEEEECCCCCCCCEEEEHHCC LSLCLLNNYQGIVPDGLLVSRGLLLKNLSSSRNISQLSEAFHKLDLHSFAPFTLLAFAPN EEEEEECCCCCCCCCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCC LTQHHGLVIAYMWDGIQQKIVETDSPLFSSGVDLERVQAYRQAKYDQLMATGKNQQNLLQ CCCCCCEEEEEECCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH FHSHHHSEQPHLATCMHREDAHTVSFTHLRNLHGQASMFYVPGSPCEPIKPCQINQQRFT HHHHCCCCCCHHHHHHCCCCCCEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEE FDLSPAINL EECCCCCCC >Mature Secondary Structure MCSVSWLLEDNGYQVFFNRDEQKTRALAMPPKQYRVNGVDIIMPLDPTGGGSWISINEFG CCCEEEEEECCCEEEEEECCCHHHHEECCCCHHEEECCEEEEEECCCCCCCCEEEEHHCC LSLCLLNNYQGIVPDGLLVSRGLLLKNLSSSRNISQLSEAFHKLDLHSFAPFTLLAFAPN EEEEEECCCCCCCCCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCC LTQHHGLVIAYMWDGIQQKIVETDSPLFSSGVDLERVQAYRQAKYDQLMATGKNQQNLLQ CCCCCCEEEEEECCCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH FHSHHHSEQPHLATCMHREDAHTVSFTHLRNLHGQASMFYVPGSPCEPIKPCQINQQRFT HHHHCCCCCCHHHHHHCCCCCCEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEE FDLSPAINL EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA