| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is arcA [H]
Identifier: 218710658
GI number: 218710658
Start: 2906179
End: 2907399
Strand: Direct
Name: arcA [H]
Synonym: VS_2738
Alternate gene names: 218710658
Gene position: 2906179-2907399 (Clockwise)
Preceding gene: 218710655
Following gene: 218710659
Centisome position: 88.08
GC content: 46.44
Gene sequence:
>1221_bases ATGAGTAAGCTGTACGTTGGCTCCGAAGTCGGTCAATTAAGACGAGTTCTCCTAAATAGGCCTGAAAGGGCACTCACCCA CCTCACCCCTTCTAACTGTCATGAGCTACTCTTTGATGATGTACTTGCAGTAGAAGCAGCAGGTGAAGAACACGATGCCT TTGCGACAACACTTCGTAACCAAGACGTTGAAGTGTTATTACTGCATGACCTACTGGTTGAGACACTCGCTGTAGCACAA GCTCGTGAGTGGCTGCTTAATACTCAAATCTCTGATTTCCGTTACGGCCCTACATTCGCACGTGATTTAAGAGAGTACCT TGCTCAAATGGACAATGAGCACTTGGCTACGATCCTACTTGGTGGTTTAGCCTATTCTGAGCTTCCTATTAAATCTTCTT CAATGCTACCGAAGATGCACCGCCCACTTGATTTCGTTATTGAGCCGCTACCTAACCATCTATTTACCCGCGATACTTCT TGCTGGGTTTATGGCGGTGTCTCTCTTAACCCTATGATGATGCCTGCTCGTCAACGAGAAACGAATCACTTGCGAGCAAT ATATCGCTGGCACCCTGTATTCGCGGGGCAAGATTTCATTAAGTACTTCGGTGATGAAGATCTTCATTACGACAACGCCA ATATTGAAGGGGGTGATGTACTGGTAATCGGTAAAGGCGCTGTTCTTATCGGTATTTCAGAGCGTACCAAGCCACAAGGT GTCGAAAACCTAGCTGCGAGTTTATTCAAGTCCGGTCAAGCTAAAGAAGTGATTGCGATTGATTTACCGAAGCACCGCTC TTGTATGCACCTTGATACGGTCATGACGCACATGGATATCGACACATTCTCTGTCTATCCAGAGATCGTTCGCAAAGACT TAGACACCTGGCGCTTAACGCCAAAAGAAAATGGCGAAATGCGAGTAGAGAAAGCTGAAAACTACCTAACAGCGATTGAA GGCGCACTGGATCTCGATCAACTGAAGATCATCACAACTGGTGGTGATAACTACGAAGCTGAACGTGAACAGTGGAATGA CGCTAACAACGTACTGACGGTGAAACCGGGTACGGTTATCGGTTATGAGCGTAATGTTTACACCAATGAGAAATACGACA AAGCAGGCATCGAAGTTCTGACAATTCCAGGCAATGAACTGGGTCGCGGTCGTGGTGGCGCTCGTTGCATGAGCTGTCCT ATAGAAAGAGACGGTATTTAA
Upstream 100 bases:
>100_bases AAAATATCAAAATAACACAACCTTTACACAAGTTTCAAAACTTGCATATTACGAACAAGCTTGTCATAAATAGACGCTGG ATTAATAGTAAGGATGCAAA
Downstream 100 bases:
>100_bases CTCAAGTAGTTCAGTAAAGCGAACACATAACTTATCTAGGCCAGTACCATTGTACTGGCCTTTTTTATCAAATTAACAAA ATAAATATTCACAAATGTAG
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSKLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGEEHDAFATTLRNQDVEVLLLHDLLVETLAVAQ AREWLLNTQISDFRYGPTFARDLREYLAQMDNEHLATILLGGLAYSELPIKSSSMLPKMHRPLDFVIEPLPNHLFTRDTS CWVYGGVSLNPMMMPARQRETNHLRAIYRWHPVFAGQDFIKYFGDEDLHYDNANIEGGDVLVIGKGAVLIGISERTKPQG VENLAASLFKSGQAKEVIAIDLPKHRSCMHLDTVMTHMDIDTFSVYPEIVRKDLDTWRLTPKENGEMRVEKAENYLTAIE GALDLDQLKIITTGGDNYEAEREQWNDANNVLTVKPGTVIGYERNVYTNEKYDKAGIEVLTIPGNELGRGRGGARCMSCP IERDGI
Sequences:
>Translated_406_residues MSKLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGEEHDAFATTLRNQDVEVLLLHDLLVETLAVAQ AREWLLNTQISDFRYGPTFARDLREYLAQMDNEHLATILLGGLAYSELPIKSSSMLPKMHRPLDFVIEPLPNHLFTRDTS CWVYGGVSLNPMMMPARQRETNHLRAIYRWHPVFAGQDFIKYFGDEDLHYDNANIEGGDVLVIGKGAVLIGISERTKPQG VENLAASLFKSGQAKEVIAIDLPKHRSCMHLDTVMTHMDIDTFSVYPEIVRKDLDTWRLTPKENGEMRVEKAENYLTAIE GALDLDQLKIITTGGDNYEAEREQWNDANNVLTVKPGTVIGYERNVYTNEKYDKAGIEVLTIPGNELGRGRGGARCMSCP IERDGI >Mature_405_residues SKLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGEEHDAFATTLRNQDVEVLLLHDLLVETLAVAQA REWLLNTQISDFRYGPTFARDLREYLAQMDNEHLATILLGGLAYSELPIKSSSMLPKMHRPLDFVIEPLPNHLFTRDTSC WVYGGVSLNPMMMPARQRETNHLRAIYRWHPVFAGQDFIKYFGDEDLHYDNANIEGGDVLVIGKGAVLIGISERTKPQGV ENLAASLFKSGQAKEVIAIDLPKHRSCMHLDTVMTHMDIDTFSVYPEIVRKDLDTWRLTPKENGEMRVEKAENYLTAIEG ALDLDQLKIITTGGDNYEAEREQWNDANNVLTVKPGTVIGYERNVYTNEKYDKAGIEVLTIPGNELGRGRGGARCMSCPI ERDGI
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 - InterPro: IPR003876 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: =3.5.3.6 [H]
Molecular weight: Translated: 45723; Mature: 45591
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGEEHDAFATTLRN CCCEECCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHCC QDVEVLLLHDLLVETLAVAQAREWLLNTQISDFRYGPTFARDLREYLAQMDNEHLATILL CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHH GGLAYSELPIKSSSMLPKMHRPLDFVIEPLPNHLFTRDTSCWVYGGVSLNPMMMPARQRE HHHHHCCCCCCCCCCCHHHHCCHHHHHCCCCCHHHCCCCCEEEEECCCCCCCCCCCHHCC TNHLRAIYRWHPVFAGQDFIKYFGDEDLHYDNANIEGGDVLVIGKGAVLIGISERTKPQG CHHHEEEEEECCCCCCCHHHHHCCCCCCEECCCCCCCCCEEEEECCEEEEEECCCCCCCC VENLAASLFKSGQAKEVIAIDLPKHRSCMHLDTVMTHMDIDTFSVYPEIVRKDLDTWRLT HHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEECC PKENGEMRVEKAENYLTAIEGALDLDQLKIITTGGDNYEAEREQWNDANNVLTVKPGTVI CCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEECCCEEE GYERNVYTNEKYDKAGIEVLTIPGNELGRGRGGARCMSCPIERDGI EEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure SKLYVGSEVGQLRRVLLNRPERALTHLTPSNCHELLFDDVLAVEAAGEEHDAFATTLRN CCEECCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHCC QDVEVLLLHDLLVETLAVAQAREWLLNTQISDFRYGPTFARDLREYLAQMDNEHLATILL CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHH GGLAYSELPIKSSSMLPKMHRPLDFVIEPLPNHLFTRDTSCWVYGGVSLNPMMMPARQRE HHHHHCCCCCCCCCCCHHHHCCHHHHHCCCCCHHHCCCCCEEEEECCCCCCCCCCCHHCC TNHLRAIYRWHPVFAGQDFIKYFGDEDLHYDNANIEGGDVLVIGKGAVLIGISERTKPQG CHHHEEEEEECCCCCCCHHHHHCCCCCCEECCCCCCCCCEEEEECCEEEEEECCCCCCCC VENLAASLFKSGQAKEVIAIDLPKHRSCMHLDTVMTHMDIDTFSVYPEIVRKDLDTWRLT HHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEECC PKENGEMRVEKAENYLTAIEGALDLDQLKIITTGGDNYEAEREQWNDANNVLTVKPGTVI CCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEECCCEEE GYERNVYTNEKYDKAGIEVLTIPGNELGRGRGGARCMSCPIERDGI EEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]