| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yjgM [H]
Identifier: 218710655
GI number: 218710655
Start: 2903264
End: 2904169
Strand: Direct
Name: yjgM [H]
Synonym: VS_2735
Alternate gene names: 218710655
Gene position: 2903264-2904169 (Clockwise)
Preceding gene: 218710654
Following gene: 218710658
Centisome position: 88.0
GC content: 44.04
Gene sequence:
>906_bases ATGACTTCAGCACAACTTAGAGAATTATCACGTCAGCTCGTTCGACAGCTTGGAATGCTCGACAAAGATTGTGGTGATAT TGCCCTGCCTCCGATTCAAGCTCATACACTGATCGAACTAGAACAGCAGCCATTAACCGTGAACCAATTAGCGGATAAGC TCAATATTGATAAGTCTAACGCCAGTAGAGCAGTTAACAATCTAGCGAAGAACTCGTTAATTCAAACCTCACCACACCCC AACGATAAGCGCAGTGTTGTGGCTTCAGTAACAGATCAAGGGAAAAACACTCTTGCCAAACTTCACAATCAACAAAATCA ATTTTATGACTCGGTACTTGAGCATTTAACGGAAGCGGAAACTCAACAAGTTTCGGGGGGAATCGAGCACTACCTTAAAG CACTGCAACAAAGCCACGCTTCAATCGATGTGGTGGTTCGCCCCCTACAACAGCAGGACAACATCGTAGTGGCCAATGTG ATTCGCCAAGTCTCTTATGAAAACGGGCTAACTGAAGATAAAGGTTATGGTGTGGCTGATCCCACCTTAGAAGACATGTT CAGTGTTTATAACAATGAAAGATCTCAGTATTGGGTGATTGAACTTGATGGAAAGGTTGTTGGTGGTGGTGGATTTGCAC CACTAGCAGGTATGCCAGAAGTCTGTGAACTGCAAAAGATGTACTTCTTGCCAGAAACCAGAAGCAAAGGCTTAGCGAAG AAGTTGGTTAATATGTCGATGGAGAAAGCTAAGGAATTGGGCTATCAACATATGTATCTAGAAACGACCGAATGTCTTAA TGCCGCCGTTAAGCTTTACGAAAAATTGGGCTTTGAACACCTTGATTCAGCCTGGGGAGAAACAGGCCATGACGCTTGTG AGGTTGTCATGGCCAAAACGCTATAA
Upstream 100 bases:
>100_bases TGTTTGCACCAACATGCTTAACCTAAACAGTTTACTGTTGACATGGTTGCGATTCGCAATTAAATTATAGTTGTACGTCG CAACTATATTGAGAGGCAAT
Downstream 100 bases:
>100_bases TGTGTTTTTGAAATAGGGTGAGCGTCGGCAGTTCATTAGATGACAAACGAGTGAACAAATTAATTTATTGCGTAAAGGGC TAATCGAATAACCGCTAGTT
Product: histone acetyltransferase HPA2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTSAQLRELSRQLVRQLGMLDKDCGDIALPPIQAHTLIELEQQPLTVNQLADKLNIDKSNASRAVNNLAKNSLIQTSPHP NDKRSVVASVTDQGKNTLAKLHNQQNQFYDSVLEHLTEAETQQVSGGIEHYLKALQQSHASIDVVVRPLQQQDNIVVANV IRQVSYENGLTEDKGYGVADPTLEDMFSVYNNERSQYWVIELDGKVVGGGGFAPLAGMPEVCELQKMYFLPETRSKGLAK KLVNMSMEKAKELGYQHMYLETTECLNAAVKLYEKLGFEHLDSAWGETGHDACEVVMAKTL
Sequences:
>Translated_301_residues MTSAQLRELSRQLVRQLGMLDKDCGDIALPPIQAHTLIELEQQPLTVNQLADKLNIDKSNASRAVNNLAKNSLIQTSPHP NDKRSVVASVTDQGKNTLAKLHNQQNQFYDSVLEHLTEAETQQVSGGIEHYLKALQQSHASIDVVVRPLQQQDNIVVANV IRQVSYENGLTEDKGYGVADPTLEDMFSVYNNERSQYWVIELDGKVVGGGGFAPLAGMPEVCELQKMYFLPETRSKGLAK KLVNMSMEKAKELGYQHMYLETTECLNAAVKLYEKLGFEHLDSAWGETGHDACEVVMAKTL >Mature_300_residues TSAQLRELSRQLVRQLGMLDKDCGDIALPPIQAHTLIELEQQPLTVNQLADKLNIDKSNASRAVNNLAKNSLIQTSPHPN DKRSVVASVTDQGKNTLAKLHNQQNQFYDSVLEHLTEAETQQVSGGIEHYLKALQQSHASIDVVVRPLQQQDNIVVANVI RQVSYENGLTEDKGYGVADPTLEDMFSVYNNERSQYWVIELDGKVVGGGGFAPLAGMPEVCELQKMYFLPETRSKGLAKK LVNMSMEKAKELGYQHMYLETTECLNAAVKLYEKLGFEHLDSAWGETGHDACEVVMAKTL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI48995002, Length=158, Percent_Identity=58.8607594936709, Blast_Score=165, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 33469; Mature: 33338
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAQLRELSRQLVRQLGMLDKDCGDIALPPIQAHTLIELEQQPLTVNQLADKLNIDKSN CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHCCCHHH ASRAVNNLAKNSLIQTSPHPNDKRSVVASVTDQGKNTLAKLHNQQNQFYDSVLEHLTEAE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQQVSGGIEHYLKALQQSHASIDVVVRPLQQQDNIVVANVIRQVSYENGLTEDKGYGVAD HHHHHCHHHHHHHHHHHCCCCHHHHEECHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PTLEDMFSVYNNERSQYWVIELDGKVVGGGGFAPLAGMPEVCELQKMYFLPETRSKGLAK CCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH KLVNMSMEKAKELGYQHMYLETTECLNAAVKLYEKLGFEHLDSAWGETGHDACEVVMAKT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHC L C >Mature Secondary Structure TSAQLRELSRQLVRQLGMLDKDCGDIALPPIQAHTLIELEQQPLTVNQLADKLNIDKSN CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHCCCHHH ASRAVNNLAKNSLIQTSPHPNDKRSVVASVTDQGKNTLAKLHNQQNQFYDSVLEHLTEAE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQQVSGGIEHYLKALQQSHASIDVVVRPLQQQDNIVVANVIRQVSYENGLTEDKGYGVAD HHHHHCHHHHHHHHHHHCCCCHHHHEECHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PTLEDMFSVYNNERSQYWVIELDGKVVGGGGFAPLAGMPEVCELQKMYFLPETRSKGLAK CCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH KLVNMSMEKAKELGYQHMYLETTECLNAAVKLYEKLGFEHLDSAWGETGHDACEVVMAKT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]