Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710643

Identifier: 218710643

GI number: 218710643

Start: 2884757

End: 2885164

Strand: Reverse

Name: 218710643

Synonym: VS_2709

Alternate gene names: NA

Gene position: 2885164-2884757 (Counterclockwise)

Preceding gene: 218710644

Following gene: 218710641

Centisome position: 87.45

GC content: 38.73

Gene sequence:

>408_bases
ATGGGGCGAACTATGAAATTAAGCTTTAACTTTGAAGATGCAAGTCAGATCTTTGTAGGATCTTTTGCTTTGGCTGTACC
GATTTCTTTTTCCGAAGAAGCCTGGAAGTTAGGGGAGACTTTGCCTACTGCTAATCTGTTGCTGCTATTTTTATTATCAG
CAGTGTTCTTAGGCTTTTATACTTATGAAAGTGTCTTTCAGAAAAATGTTGTTGCACGCATGCCGGTGTTTATTTTCAGA
ATTGTTATTGCTTATGCTATGACGGCGTTGGTAGTTGCTTTGGTACTGACATGTTTGGATAAATTGCCTCTATTAAGCGA
TCCAATAGTCTCGTTTAAACGTGTCATTGTTATATCAATGCCCGCGTCTATGGGGGCTATTATAGTGGATAGTTTCGATA
AAGAGTGA

Upstream 100 bases:

>100_bases
AGAAGGGCGTTATTGTTCGCTTGGTAAGAATAGACTCAAAAAAATCATCGGGTGATATTTTAGTGATTATTTTAACAAAT
AGATAAAGCCTTAAAAGCTA

Downstream 100 bases:

>100_bases
AACTGTATATCACCCAGGTTAAGTCATCAACAGAGCCATTCTGGCGCTTATTTGGTTCACTCTTAGATAACACAAGTAGC
AAGCTCGCTAGAAAGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MGRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFYTYESVFQKNVVARMPVFIFR
IVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISMPASMGAIIVDSFDKE

Sequences:

>Translated_135_residues
MGRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFYTYESVFQKNVVARMPVFIFR
IVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISMPASMGAIIVDSFDKE
>Mature_134_residues
GRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFYTYESVFQKNVVARMPVFIFRI
VIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISMPASMGAIIVDSFDKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14939; Mature: 14808

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFY
CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TYESVFQKNVVARMPVFIFRIVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEC
PASMGAIIVDSFDKE
CCCCCCCEECCCCCC
>Mature Secondary Structure 
GRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFY
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TYESVFQKNVVARMPVFIFRIVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEC
PASMGAIIVDSFDKE
CCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA