| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is oppD [H]
Identifier: 218710470
GI number: 218710470
Start: 2689769
End: 2690752
Strand: Direct
Name: oppD [H]
Synonym: VS_2509
Alternate gene names: 218710470
Gene position: 2689769-2690752 (Clockwise)
Preceding gene: 218710469
Following gene: 218710471
Centisome position: 81.53
GC content: 47.46
Gene sequence:
>984_bases ATGTCTGAACCACTAATTTCTATCCGCAATTTATGCGTGGATTACATCACAGAGTCTGGCGATGTACGTGCGTGTAACAA CGTAAGTTTCGACATTGCTCCAGGTGAAGTATTCGGCCTAGCTGGTGAATCTGGCTGTGGTAAATCAACTGTTGCTTTCT CTCTTATGCGTCTGCACAAGCCGCCCGCTTACATCAGTGGTGGTGAGGTTATCTTCAATGGTGAGAACATCCTTGAATAC AGTGATGACCGTATGCAAGCGTTCCGTTGGAGCGAGATGTCGATGGTATTCCAGAGTGCGATGAACGCACTCAATCCCGT ATTACCAATGGAAGAGCAGTTCTGTGACGTAATTATGCGTCACACCAACATGACTCGTGAGCAAGCTAAGCAACGCGCTG AAGGCCTACTTGAAATCGTAGATATTCACCCGAGCCGATTGAGTGACTACCCTCACCAATTCTCTGGCGGCATGCGTCAG CGCTTGGTTATTGCTATCGCTTTAGCATTGAATCCAAAGCTGATCATTATGGATGAGCCAACGACCGCACTTGATGTGGT TGTTCAACGCGAAATCCTACAAAAGATCTATGCACTAAAAGAAGAGTTTGGCTTCTCGATTCTGTTCATCACCCATGACT TGTCATTGATGGTCGAGTTCTCTGACCGTATCGGCATCATGTACTCAGGTGAGCTCATCGAGGTTGCTAATGCTCAAGAT ATTCTAGAAAACCCTTACCACCCTTATACCAAAGGGCTGGGAAGTTCTTTCCCTCCACTAACAGGGCCAAAGACAAAACT AGCAGGCATTCCGGGTAACCCTCTGAACCTGTTGGAGATCCCTGAAGGGTGTCGTTTCCAAGCTCGTTGTGATCGTGTAC ATGAAACGTGTACCAAGGTGCCAACCAAGCTGCGTTCTATCGACCCGGGACATTTGTCTAACTGCCACCTGTACGGTGAC CCAATAGTACAAAGGAAGCTATAG
Upstream 100 bases:
>100_bases AAGGCATGAAGCGTTGGAAGAAATTAGCAGCACAAGACAAAGAAGAACGTGAACCTGAACTACCACCACAAAATGCACTT TGGAGCGGAGATAAATAATC
Downstream 100 bases:
>100_bases CTTGCACGCTGATTCAGCGTGAATAACGAATAAGGCGGCTCGACCGCCGAAATGCAAGCAAAGCGAATAAGGATTCTGGA GACAATTATGAGCAAAGATT
Product: oligopeptide transport ATP-binding protein OppD
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSEPLISIRNLCVDYITESGDVRACNNVSFDIAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAYISGGEVIFNGENILEY SDDRMQAFRWSEMSMVFQSAMNALNPVLPMEEQFCDVIMRHTNMTREQAKQRAEGLLEIVDIHPSRLSDYPHQFSGGMRQ RLVIAIALALNPKLIIMDEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVANAQD ILENPYHPYTKGLGSSFPPLTGPKTKLAGIPGNPLNLLEIPEGCRFQARCDRVHETCTKVPTKLRSIDPGHLSNCHLYGD PIVQRKL
Sequences:
>Translated_327_residues MSEPLISIRNLCVDYITESGDVRACNNVSFDIAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAYISGGEVIFNGENILEY SDDRMQAFRWSEMSMVFQSAMNALNPVLPMEEQFCDVIMRHTNMTREQAKQRAEGLLEIVDIHPSRLSDYPHQFSGGMRQ RLVIAIALALNPKLIIMDEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVANAQD ILENPYHPYTKGLGSSFPPLTGPKTKLAGIPGNPLNLLEIPEGCRFQARCDRVHETCTKVPTKLRSIDPGHLSNCHLYGD PIVQRKL >Mature_326_residues SEPLISIRNLCVDYITESGDVRACNNVSFDIAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAYISGGEVIFNGENILEYS DDRMQAFRWSEMSMVFQSAMNALNPVLPMEEQFCDVIMRHTNMTREQAKQRAEGLLEIVDIHPSRLSDYPHQFSGGMRQR LVIAIALALNPKLIIMDEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVANAQDI LENPYHPYTKGLGSSFPPLTGPKTKLAGIPGNPLNLLEIPEGCRFQARCDRVHETCTKVPTKLRSIDPGHLSNCHLYGDP IVQRKL
Specific function: Part of the binding-protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9665248, Length=249, Percent_Identity=27.710843373494, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI9955968, Length=248, Percent_Identity=28.6290322580645, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI9955966, Length=248, Percent_Identity=28.6290322580645, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI45243524, Length=248, Percent_Identity=28.6290322580645, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI9961252, Length=252, Percent_Identity=26.5873015873016, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4505771, Length=252, Percent_Identity=26.5873015873016, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI9961250, Length=254, Percent_Identity=25.1968503937008, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21536376, Length=241, Percent_Identity=27.3858921161826, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI150417984, Length=238, Percent_Identity=25.2100840336134, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI42741659, Length=230, Percent_Identity=25.6521739130435, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI47078218, Length=230, Percent_Identity=26.5217391304348, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI45446740, Length=230, Percent_Identity=26.5217391304348, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI42490749, Length=253, Percent_Identity=24.5059288537549, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI116734710, Length=230, Percent_Identity=26.9565217391304, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI21536378, Length=241, Percent_Identity=25.7261410788382, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27436953, Length=219, Percent_Identity=25.5707762557078, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI153792144, Length=225, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI9955963, Length=232, Percent_Identity=27.1551724137931, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI6005701, Length=218, Percent_Identity=26.605504587156, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI31657092, Length=236, Percent_Identity=24.1525423728814, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI48994883, Length=316, Percent_Identity=42.0886075949367, Blast_Score=264, Evalue=5e-72, Organism=Escherichia coli, GI1787759, Length=305, Percent_Identity=39.344262295082, Blast_Score=230, Evalue=8e-62, Organism=Escherichia coli, GI1789963, Length=314, Percent_Identity=36.3057324840764, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1788506, Length=275, Percent_Identity=40.7272727272727, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI145693107, Length=268, Percent_Identity=38.4328358208955, Blast_Score=204, Evalue=7e-54, Organism=Escherichia coli, GI1789962, Length=325, Percent_Identity=34.4615384615385, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1787758, Length=309, Percent_Identity=34.6278317152104, Blast_Score=187, Evalue=8e-49, Organism=Escherichia coli, GI1787500, Length=285, Percent_Identity=36.8421052631579, Blast_Score=186, Evalue=1e-48, Organism=Escherichia coli, GI1787548, Length=324, Percent_Identity=30.8641975308642, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI48994997, Length=261, Percent_Identity=35.632183908046, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1789891, Length=233, Percent_Identity=34.7639484978541, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1787547, Length=259, Percent_Identity=31.2741312741313, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789032, Length=228, Percent_Identity=34.6491228070175, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1786398, Length=257, Percent_Identity=30.7392996108949, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI87081791, Length=247, Percent_Identity=29.9595141700405, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1790162, Length=253, Percent_Identity=30.0395256916996, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI87081709, Length=243, Percent_Identity=30.0411522633745, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=31.404958677686, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=32.4561403508772, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788225, Length=253, Percent_Identity=29.2490118577075, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI1789890, Length=240, Percent_Identity=27.9166666666667, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787712, Length=261, Percent_Identity=29.5019157088123, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=32.3008849557522, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789672, Length=256, Percent_Identity=28.515625, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=28.6343612334802, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1788450, Length=232, Percent_Identity=27.1551724137931, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787089, Length=223, Percent_Identity=31.390134529148, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790467, Length=239, Percent_Identity=28.4518828451883, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788644, Length=262, Percent_Identity=29.0076335877863, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786345, Length=251, Percent_Identity=27.8884462151394, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787105, Length=230, Percent_Identity=28.2608695652174, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87082267, Length=239, Percent_Identity=25.5230125523013, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=29.8076923076923, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789864, Length=256, Percent_Identity=25.78125, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786703, Length=236, Percent_Identity=29.2372881355932, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1789873, Length=219, Percent_Identity=29.6803652968037, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786803, Length=250, Percent_Identity=24.8, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790739, Length=242, Percent_Identity=26.0330578512397, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1789586, Length=228, Percent_Identity=30.7017543859649, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI87081782, Length=244, Percent_Identity=27.0491803278689, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1786872, Length=210, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1787143, Length=245, Percent_Identity=27.7551020408163, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1787792, Length=212, Percent_Identity=26.8867924528302, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786563, Length=228, Percent_Identity=28.0701754385965, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786698, Length=212, Percent_Identity=27.3584905660377, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787112, Length=258, Percent_Identity=27.1317829457364, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789991, Length=269, Percent_Identity=27.1375464684015, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790190, Length=231, Percent_Identity=25.974025974026, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI48995001, Length=213, Percent_Identity=27.2300469483568, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788210, Length=238, Percent_Identity=28.1512605042017, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI87082268, Length=245, Percent_Identity=23.6734693877551, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789593, Length=237, Percent_Identity=26.5822784810127, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788053, Length=209, Percent_Identity=27.7511961722488, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788472, Length=219, Percent_Identity=27.8538812785388, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI48994943, Length=227, Percent_Identity=28.6343612334802, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193209708, Length=238, Percent_Identity=28.9915966386555, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193202349, Length=248, Percent_Identity=28.6290322580645, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17558664, Length=248, Percent_Identity=27.8225806451613, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71992290, Length=251, Percent_Identity=29.0836653386454, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17541710, Length=238, Percent_Identity=28.1512605042017, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565938, Length=256, Percent_Identity=26.171875, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI212646699, Length=260, Percent_Identity=27.6923076923077, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71984940, Length=247, Percent_Identity=26.7206477732794, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17511077, Length=230, Percent_Identity=27.8260869565217, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193211015, Length=225, Percent_Identity=28, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193211017, Length=243, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71996809, Length=243, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71983523, Length=243, Percent_Identity=24.2798353909465, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983510, Length=243, Percent_Identity=24.2798353909465, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983516, Length=243, Percent_Identity=24.2798353909465, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17569145, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI115533592, Length=248, Percent_Identity=26.6129032258064, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115534520, Length=222, Percent_Identity=27.9279279279279, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71996550, Length=225, Percent_Identity=28, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17543740, Length=244, Percent_Identity=26.2295081967213, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=230, Percent_Identity=27.8260869565217, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=257, Percent_Identity=26.4591439688716, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI85726357, Length=259, Percent_Identity=27.027027027027, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI17136662, Length=229, Percent_Identity=27.9475982532751, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24643674, Length=271, Percent_Identity=25.4612546125461, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24659289, Length=242, Percent_Identity=30.1652892561983, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI116007184, Length=213, Percent_Identity=29.1079812206573, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363262, Length=236, Percent_Identity=27.1186440677966, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=29.0322580645161, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574744, Length=210, Percent_Identity=28.0952380952381, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24653245, Length=236, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28574150, Length=223, Percent_Identity=26.0089686098655, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI116007328, Length=223, Percent_Identity=26.0089686098655, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=28.0701754385965, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641565, Length=228, Percent_Identity=25.8771929824561, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI23397593, Length=227, Percent_Identity=26.431718061674, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24583969, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI45552353, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552335, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552343, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552349, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552351, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552363, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552347, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552357, Length=260, Percent_Identity=25.3846153846154, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552339, Length=235, Percent_Identity=25.9574468085106, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552355, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552361, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552337, Length=235, Percent_Identity=25.9574468085106, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552345, Length=235, Percent_Identity=25.9574468085106, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552341, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552359, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550972, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28573571, Length=233, Percent_Identity=27.8969957081545, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI28573573, Length=233, Percent_Identity=27.8969957081545, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 36503; Mature: 36371
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLISIRNLCVDYITESGDVRACNNVSFDIAPGEVFGLAGESGCGKSTVAFSLMRLHK CCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHCC PPAYISGGEVIFNGENILEYSDDRMQAFRWSEMSMVFQSAMNALNPVLPMEEQFCDVIMR CCCEECCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HTNMTREQAKQRAEGLLEIVDIHPSRLSDYPHQFSGGMRQRLVIAIALALNPKLIIMDEP HCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHHEEEECCCEEEEEECC TTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVANAQD CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCCCCEEECCCEEEECCHHH ILENPYHPYTKGLGSSFPPLTGPKTKLAGIPGNPLNLLEIPEGCRFQARCDRVHETCTKV HHHCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH PTKLRSIDPGHLSNCHLYGDPIVQRKL HHHHHCCCCCCCCCCEEECCCHHHCCC >Mature Secondary Structure SEPLISIRNLCVDYITESGDVRACNNVSFDIAPGEVFGLAGESGCGKSTVAFSLMRLHK CCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHCC PPAYISGGEVIFNGENILEYSDDRMQAFRWSEMSMVFQSAMNALNPVLPMEEQFCDVIMR CCCEECCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HTNMTREQAKQRAEGLLEIVDIHPSRLSDYPHQFSGGMRQRLVIAIALALNPKLIIMDEP HCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHHEEEECCCEEEEEECC TTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVANAQD CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCCCCEEECCCEEEECCHHH ILENPYHPYTKGLGSSFPPLTGPKTKLAGIPGNPLNLLEIPEGCRFQARCDRVHETCTKV HHHCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH PTKLRSIDPGHLSNCHLYGDPIVQRKL HHHHHCCCCCCCCCCEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]