| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710393
Identifier: 218710393
GI number: 218710393
Start: 2600314
End: 2601462
Strand: Direct
Name: 218710393
Synonym: VS_2430
Alternate gene names: NA
Gene position: 2600314-2601462 (Clockwise)
Preceding gene: 218710390
Following gene: 218710411
Centisome position: 78.81
GC content: 47.17
Gene sequence:
>1149_bases ATGCTTTCAATTTTTAAAACCTTTTTCTGGCTTGGCTGGATTAGCTTCGGTGGACCAGCGGCACACATTGGCTACTTCCA TAAAGCCTTTGTTGAGAAACTGAATTGGTTATCCGACGAAGAGTACGGGCAAATTGTCGCCCTCAGTCAATTTCTGCCGG GTCCAGGCTCAAGTCAGGTTGGCTTCGCGGTTGGTTACAAAAAAGGTGGCTTAACCGGTGCGATTGCCGCATTTGTAGGC TTCACCTCCCCTTCTGTCATCCTAATGTTGATATTGGCCTTAGTGAGCAACCAGTTGTTGGAAGCACCGCTTTTCATTTC AATCATCCACGGACTTAAGCTACTCGCGGTCGTGGTTGTAGCTGACGCCACTTTCGGCATGTACAAAAACTTTTGCCAAT CAAAGATAGCAACAGCACTGTGTGTGATCACCGCGATTGTTCTACTTTTGATTCCTGGGATCTGGCCTCAAGTCTTAGTG CTCCTATTTGCAGCGATGGTTGGCAGTAAGTTCTTAACCTCGCAAGACTTAAAAACAACGCCTTCGACACATAAGATATC CATAACACCGCTAGTGATTTTTGTAGCACTACTGATTGGTTTACCTCTGTTCAGTGCATACTCTCAAGGCATTGAAGTAT TTGGTTTATTCTACCAAGCAGGTAGTTTGGTATTCGGTGGCGGGCACGTGGTTCTTCCTCTGCTACAAAATGGTATTGGT GATCAACTGTCCCAAGATACCTTCCTAACAGGCTATGCCGCTGCGCAAGCTGTACCTGGCCCAATGTTTACATTAGCCAC TTATCTAGGTTATGTGTTGATGCCAGCGGCACCGATTACAGGTGCACTGCTCGCAACAGTTGCGGTGTTCTTACCGGGTT TCTTATTACTACTGGCTGTACTGAAGAATTGGCAGGCGATTGCAAGCAAGCCTTTGGTGGCAGGTGCGCTTACTGGTGTG AATGCGGCGGTGGTCGGTTTATTGTTGGCCGCGCTATATCAACCGATCTTCACCAGTGCAGTGAGCAGTAGCTTGGATTT CGCTCTTATCATTGTTGGTGTGTGGTTATTGAAAACCGTGAAGATGCCGATTGTTGGGTTAGTAGGTGTATTCATGTTGT TTGGCGCAGTGACAGGATTGGCGATCTGA
Upstream 100 bases:
>100_bases AAATCAATCCCATATCATTCATAGTTATAATTAAAACAATTAATTTGAATCATAGTTCAACTCCACCTAAATTACGCTAA ACATTTATCTGGAATCGATC
Downstream 100 bases:
>100_bases GCTATCCATTAATAGACAGACAAATAAGAAGTGAGAGGTTTGATCGCTTACTTCTTGTTTTCCCGCTCTTCTTTCAAAAA CTAAAAGCATCTTTTACTTC
Product: chromate transport protein ChrA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MLSIFKTFFWLGWISFGGPAAHIGYFHKAFVEKLNWLSDEEYGQIVALSQFLPGPGSSQVGFAVGYKKGGLTGAIAAFVG FTSPSVILMLILALVSNQLLEAPLFISIIHGLKLLAVVVVADATFGMYKNFCQSKIATALCVITAIVLLLIPGIWPQVLV LLFAAMVGSKFLTSQDLKTTPSTHKISITPLVIFVALLIGLPLFSAYSQGIEVFGLFYQAGSLVFGGGHVVLPLLQNGIG DQLSQDTFLTGYAAAQAVPGPMFTLATYLGYVLMPAAPITGALLATVAVFLPGFLLLLAVLKNWQAIASKPLVAGALTGV NAAVVGLLLAALYQPIFTSAVSSSLDFALIIVGVWLLKTVKMPIVGLVGVFMLFGAVTGLAI
Sequences:
>Translated_382_residues MLSIFKTFFWLGWISFGGPAAHIGYFHKAFVEKLNWLSDEEYGQIVALSQFLPGPGSSQVGFAVGYKKGGLTGAIAAFVG FTSPSVILMLILALVSNQLLEAPLFISIIHGLKLLAVVVVADATFGMYKNFCQSKIATALCVITAIVLLLIPGIWPQVLV LLFAAMVGSKFLTSQDLKTTPSTHKISITPLVIFVALLIGLPLFSAYSQGIEVFGLFYQAGSLVFGGGHVVLPLLQNGIG DQLSQDTFLTGYAAAQAVPGPMFTLATYLGYVLMPAAPITGALLATVAVFLPGFLLLLAVLKNWQAIASKPLVAGALTGV NAAVVGLLLAALYQPIFTSAVSSSLDFALIIVGVWLLKTVKMPIVGLVGVFMLFGAVTGLAI >Mature_382_residues MLSIFKTFFWLGWISFGGPAAHIGYFHKAFVEKLNWLSDEEYGQIVALSQFLPGPGSSQVGFAVGYKKGGLTGAIAAFVG FTSPSVILMLILALVSNQLLEAPLFISIIHGLKLLAVVVVADATFGMYKNFCQSKIATALCVITAIVLLLIPGIWPQVLV LLFAAMVGSKFLTSQDLKTTPSTHKISITPLVIFVALLIGLPLFSAYSQGIEVFGLFYQAGSLVFGGGHVVLPLLQNGIG DQLSQDTFLTGYAAAQAVPGPMFTLATYLGYVLMPAAPITGALLATVAVFLPGFLLLLAVLKNWQAIASKPLVAGALTGV NAAVVGLLLAALYQPIFTSAVSSSLDFALIIVGVWLLKTVKMPIVGLVGVFMLFGAVTGLAI
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 40157; Mature: 40157
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIFKTFFWLGWISFGGPAAHIGYFHKAFVEKLNWLSDEEYGQIVALSQFLPGPGSSQV CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHCCCCCCCCC GFAVGYKKGGLTGAIAAFVGFTSPSVILMLILALVSNQLLEAPLFISIIHGLKLLAVVVV CEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADATFGMYKNFCQSKIATALCVITAIVLLLIPGIWPQVLVLLFAAMVGSKFLTSQDLKTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCC PSTHKISITPLVIFVALLIGLPLFSAYSQGIEVFGLFYQAGSLVFGGGHVVLPLLQNGIG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCC DQLSQDTFLTGYAAAQAVPGPMFTLATYLGYVLMPAAPITGALLATVAVFLPGFLLLLAV CHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LKNWQAIASKPLVAGALTGVNAAVVGLLLAALYQPIFTSAVSSSLDFALIIVGVWLLKTV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KMPIVGLVGVFMLFGAVTGLAI HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSIFKTFFWLGWISFGGPAAHIGYFHKAFVEKLNWLSDEEYGQIVALSQFLPGPGSSQV CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHCCCCCCCCC GFAVGYKKGGLTGAIAAFVGFTSPSVILMLILALVSNQLLEAPLFISIIHGLKLLAVVVV CEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADATFGMYKNFCQSKIATALCVITAIVLLLIPGIWPQVLVLLFAAMVGSKFLTSQDLKTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCC PSTHKISITPLVIFVALLIGLPLFSAYSQGIEVFGLFYQAGSLVFGGGHVVLPLLQNGIG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCC DQLSQDTFLTGYAAAQAVPGPMFTLATYLGYVLMPAAPITGALLATVAVFLPGFLLLLAV CHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LKNWQAIASKPLVAGALTGVNAAVVGLLLAALYQPIFTSAVSSSLDFALIIVGVWLLKTV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KMPIVGLVGVFMLFGAVTGLAI HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]