Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710390

Identifier: 218710390

GI number: 218710390

Start: 2597089

End: 2597643

Strand: Direct

Name: 218710390

Synonym: VS_2427

Alternate gene names: NA

Gene position: 2597089-2597643 (Clockwise)

Preceding gene: 218710387

Following gene: 218710393

Centisome position: 78.72

GC content: 46.13

Gene sequence:

>555_bases
ATGTATATTTTTGGTTATGGTAGCTTGATCAACTCCTCTTCTCGTCAACTCACAGGTCAAACAGGACAAGCGATTCCTGC
GATAGTGCACGGCCTAGTGCGTCACTGGAGTAAAATCGACGACAGCTATGTTTTGTCACCGTTGATCGTCAATCTTGGTG
AGGGACAAGTGAATGGTGTTTTGCTGGAGGTCGATGATGTTGCGTTGGCTGAATTTGATCGTCGTGAGCGTGGTTATCAT
CGAATTGAGTTAAGAAACGATCAGATAGAGAGCCAAACCGAATTTAAAGCGGATCAATCGATCTGGGTATACATCAAAGA
CGAAATCGAAGCGCCTTGTGAAAACAGCCCTATCGTTCAAACCTATGTTGATACTGTCATGGCAGGATGTTTAGAGGTGT
CTGAAAGCTTTGCGGCGCACTTTGTGGAACATACACAAGGTTGGCACCATCCATTAGAAAATGATCGCCACCAGCCGAAA
TACGGCAACCTTGCTGGGGTTTCTGATCACCACCACAGTGTGATTGATGGCTTGATACTGACTGCACGCAGCTAG

Upstream 100 bases:

>100_bases
TAGACTCGAAGATGTATGAAATAAAAAACTACTGACATTTAATGAAGCCAAACATATAGTAAGACTAGTCTCAAATACAA
AAGAACAGACAGGGAACACG

Downstream 100 bases:

>100_bases
CTGATGTTACTTGTTAATAAAGGTACATAGCGAGTTAATTTAGGTTAGTGAACACATTGGGATCACCAACCTAAAGAGAG
CTTAAACGACTAGAATCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MYIFGYGSLINSSSRQLTGQTGQAIPAIVHGLVRHWSKIDDSYVLSPLIVNLGEGQVNGVLLEVDDVALAEFDRRERGYH
RIELRNDQIESQTEFKADQSIWVYIKDEIEAPCENSPIVQTYVDTVMAGCLEVSESFAAHFVEHTQGWHHPLENDRHQPK
YGNLAGVSDHHHSVIDGLILTARS

Sequences:

>Translated_184_residues
MYIFGYGSLINSSSRQLTGQTGQAIPAIVHGLVRHWSKIDDSYVLSPLIVNLGEGQVNGVLLEVDDVALAEFDRRERGYH
RIELRNDQIESQTEFKADQSIWVYIKDEIEAPCENSPIVQTYVDTVMAGCLEVSESFAAHFVEHTQGWHHPLENDRHQPK
YGNLAGVSDHHHSVIDGLILTARS
>Mature_184_residues
MYIFGYGSLINSSSRQLTGQTGQAIPAIVHGLVRHWSKIDDSYVLSPLIVNLGEGQVNGVLLEVDDVALAEFDRRERGYH
RIELRNDQIESQTEFKADQSIWVYIKDEIEAPCENSPIVQTYVDTVMAGCLEVSESFAAHFVEHTQGWHHPLENDRHQPK
YGNLAGVSDHHHSVIDGLILTARS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20664; Mature: 20664

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIFGYGSLINSSSRQLTGQTGQAIPAIVHGLVRHWSKIDDSYVLSPLIVNLGEGQVNGV
CEEEECHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCEE
LLEVDDVALAEFDRRERGYHRIELRNDQIESQTEFKADQSIWVYIKDEIEAPCENSPIVQ
EEEECCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCHHH
TYVDTVMAGCLEVSESFAAHFVEHTQGWHHPLENDRHQPKYGNLAGVSDHHHSVIDGLIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEE
TARS
ECCC
>Mature Secondary Structure
MYIFGYGSLINSSSRQLTGQTGQAIPAIVHGLVRHWSKIDDSYVLSPLIVNLGEGQVNGV
CEEEECHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCEE
LLEVDDVALAEFDRRERGYHRIELRNDQIESQTEFKADQSIWVYIKDEIEAPCENSPIVQ
EEEECCHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCHHH
TYVDTVMAGCLEVSESFAAHFVEHTQGWHHPLENDRHQPKYGNLAGVSDHHHSVIDGLIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEE
TARS
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA