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The map label for this gene is appY [C]

Identifier: 218710411

GI number: 218710411

Start: 2617809

End: 2618558

Strand: Direct

Name: appY [C]

Synonym: VS_2448

Alternate gene names: 218710411

Gene position: 2617809-2618558 (Clockwise)

Preceding gene: 218710393

Following gene: 218710413

Centisome position: 79.34

GC content: 36.4

Gene sequence:

>750_bases
ATGAAAATAGTAACCCCGTTATTATCGGATAAAGAGAGTGATTTCAACTCCGTTATTATCAATAAAATAAGTCACTATTT
CTCTATTGCAAATTTCAAACAAGACATATCTATAATCAGTAACTTAGACGTCAGACTGGTATTTTTCATTTTGAATACCC
CTGATAAAATCCAACTACTTACCATGGCTTTATCTATTTGCGAAAATTTGAACAAAAGAATTGTTATTATTTGCTCTGAC
CCGTTACCTAATATCGTTCGAAATCATAAGAATATATTTTTTATCATAGAAACAAACAGTAATCATCTGACCAGTCAATT
CGAAGAGCTTAAGGCTAAGACACGGCATATGTTCGAGTCCCACTTCGATATCGACAGAGACACAAACAACAACAACCAGC
TGCCTGTAAAAGCCTTCACATCCGAAGTCGTTAACTTTGTGATGGACAACATCAACAAAGAAATCAGAGAAACAGAGATC
GCCGAGAAATGTCACTGTTCAACCACCTATTTTTCTAAGAAGTTTCATCTACACTTTGGAGTAAGCTTTAGAGACTTCGT
GTGCGATAAACGCATTCTACTTGCCAAAAAGTTAATCGAGGCAGATACCGAATCAAAAATTGCTGTCATTGCCTATCAAT
GTGGATACAAGGATGTGTCATATTTCTCGAGAATTTTTAAGAAACGGACTGGAGTAACGCCTGCAAGTTACAGGCGAGCC
TGCACAGATAACGGAAAACAAAGAACATAA

Upstream 100 bases:

>100_bases
TTACTTGCACTTTTTTGTGGTGCTTCTAATCTAAATATAAAGCTTCATTAATTAGCCACTTTTAGACTAAAAGAGAATAT
GAAATGCATTGGGTATCTGT

Downstream 100 bases:

>100_bases
ACGCTAATTTTACTCCCTAAAAGAAAAAATCATGGTACATTTAACATGATTTTAACAAAAATAACTTAGCGAAAAACATG
GAGTTAGACAATGATTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Two-Component Response Regulator; Transcriptional Regulator; Response Regulator Receiver Protein; Response Regulator; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcriptional Regulator; DNA-Bindng Response Regulator AraC Family; Response Regulator Receiver Domain Protein; Two Component Transcriptional Regulator; 2-Isopropylmalate Synthase; AraC Family Transcription Regulator; Response Regulator Receiver; Two Component Transcriptional Regulator Arac Family; Transcription Activator Regulation Of FeuABC-YbbA Operon; Two-Component System Response Regulator; Two Component AraC Family Transcriptional Regulator

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKIVTPLLSDKESDFNSVIINKISHYFSIANFKQDISIISNLDVRLVFFILNTPDKIQLLTMALSICENLNKRIVIICSD
PLPNIVRNHKNIFFIIETNSNHLTSQFEELKAKTRHMFESHFDIDRDTNNNNQLPVKAFTSEVVNFVMDNINKEIRETEI
AEKCHCSTTYFSKKFHLHFGVSFRDFVCDKRILLAKKLIEADTESKIAVIAYQCGYKDVSYFSRIFKKRTGVTPASYRRA
CTDNGKQRT

Sequences:

>Translated_249_residues
MKIVTPLLSDKESDFNSVIINKISHYFSIANFKQDISIISNLDVRLVFFILNTPDKIQLLTMALSICENLNKRIVIICSD
PLPNIVRNHKNIFFIIETNSNHLTSQFEELKAKTRHMFESHFDIDRDTNNNNQLPVKAFTSEVVNFVMDNINKEIRETEI
AEKCHCSTTYFSKKFHLHFGVSFRDFVCDKRILLAKKLIEADTESKIAVIAYQCGYKDVSYFSRIFKKRTGVTPASYRRA
CTDNGKQRT
>Mature_249_residues
MKIVTPLLSDKESDFNSVIINKISHYFSIANFKQDISIISNLDVRLVFFILNTPDKIQLLTMALSICENLNKRIVIICSD
PLPNIVRNHKNIFFIIETNSNHLTSQFEELKAKTRHMFESHFDIDRDTNNNNQLPVKAFTSEVVNFVMDNINKEIRETEI
AEKCHCSTTYFSKKFHLHFGVSFRDFVCDKRILLAKKLIEADTESKIAVIAYQCGYKDVSYFSRIFKKRTGVTPASYRRA
CTDNGKQRT

Specific function: Induces The Synthesis Of Acid Phosphatase (Appa) And Several Other Polypeptides (Such As Appbc) During The Deceleration Phase Of Growth. It Also Acts As A Transcriptional Repressor For One Group Of Proteins That Are Synthesized Preferentially In Exponenti

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28862; Mature: 28862

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVTPLLSDKESDFNSVIINKISHYFSIANFKQDISIISNLDVRLVFFILNTPDKIQLL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHH
TMALSICENLNKRIVIICSDPLPNIVRNHKNIFFIIETNSNHLTSQFEELKAKTRHMFES
HHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
HFDIDRDTNNNNQLPVKAFTSEVVNFVMDNINKEIRETEIAEKCHCSTTYFSKKFHLHFG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEEC
VSFRDFVCDKRILLAKKLIEADTESKIAVIAYQCGYKDVSYFSRIFKKRTGVTPASYRRA
CCHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHH
CTDNGKQRT
HCCCCCCCC
>Mature Secondary Structure
MKIVTPLLSDKESDFNSVIINKISHYFSIANFKQDISIISNLDVRLVFFILNTPDKIQLL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHH
TMALSICENLNKRIVIICSDPLPNIVRNHKNIFFIIETNSNHLTSQFEELKAKTRHMFES
HHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
HFDIDRDTNNNNQLPVKAFTSEVVNFVMDNINKEIRETEIAEKCHCSTTYFSKKFHLHFG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEEC
VSFRDFVCDKRILLAKKLIEADTESKIAVIAYQCGYKDVSYFSRIFKKRTGVTPASYRRA
CCHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHH
CTDNGKQRT
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA