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The map label for this gene is yaeB [C]

Identifier: 218710331

GI number: 218710331

Start: 2534695

End: 2535390

Strand: Direct

Name: yaeB [C]

Synonym: VS_2367

Alternate gene names: 218710331

Gene position: 2534695-2535390 (Clockwise)

Preceding gene: 218710328

Following gene: 218710332

Centisome position: 76.83

GC content: 46.12

Gene sequence:

>696_bases
ATGTACACCATTGAACCTGTTGGCTTTATTGAGTCTCCTTATAAAGAGAAGTTCGCTGTGCCAAGACAGCCTAGGTTAGT
ACCCACTTCTACCTCAAGAGTCAGGCTAGTTGAAGCAGCGAACTGCCTTGAGTCTGTTCGTAATATTGAACAATTTAGCC
ATGTGTGGTTATTGTTTTTGTTCGATAAGAACCTTGAAGCAGGATGGAAACCAACCGTGAGGCCACCTCGCCTTGGCGGG
AACGAACGTATTGGTGTATTCGCGTCTCGTGCCACATTCAGACCGAATGGAATAGGCATGTCTGCAGTTGAACTCAAAGG
GGTATCTCAAGAAAAGGGACAAACTTGGTTGGACTTGGGCAGTGTTGATCTCGTTGACGGCACGCCTATCATCGACATCA
AACCTTATATCCCCTACTCGGATTCAATTCCCGATGCACTAGGAGGGTTTGCCGCCGATGAACCTGAAGTATTAGATGTG
AACTTCTCGCAGCAAGCCCAAAGTAAGCTGTCTGGTCACCCACAGGCGCGCCATATCATTCAGGTGATCAAAGAAGTGCT
AGGCCAAGATCCACGACCCGCCTATAAGAAAGGCAAGCCAGACAATAAAGAATATGCGGTAAATTTGTTCGATCTTAACG
TGAAATTCGTTGTTGAAACGCTTTTCATCAATGTTACCGACATTGAACGCTTTTGA

Upstream 100 bases:

>100_bases
TGATACGTTATAACATATCAAATGATAATTATTATCAAAAGAAAAACAAGTGATTTTATGATATTTTTCCGTCTTAACTG
AAACCAGAGAACACCTTGCT

Downstream 100 bases:

>100_bases
GATCCCAAATAGGCTGATATTATATGCGGCTATATCAGATTTGCTGTCGTCACTAACTGCAGCAAATTTTCTTTTATCAA
TGATGAAACGGATACCATAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MYTIEPVGFIESPYKEKFAVPRQPRLVPTSTSRVRLVEAANCLESVRNIEQFSHVWLLFLFDKNLEAGWKPTVRPPRLGG
NERIGVFASRATFRPNGIGMSAVELKGVSQEKGQTWLDLGSVDLVDGTPIIDIKPYIPYSDSIPDALGGFAADEPEVLDV
NFSQQAQSKLSGHPQARHIIQVIKEVLGQDPRPAYKKGKPDNKEYAVNLFDLNVKFVVETLFINVTDIERF

Sequences:

>Translated_231_residues
MYTIEPVGFIESPYKEKFAVPRQPRLVPTSTSRVRLVEAANCLESVRNIEQFSHVWLLFLFDKNLEAGWKPTVRPPRLGG
NERIGVFASRATFRPNGIGMSAVELKGVSQEKGQTWLDLGSVDLVDGTPIIDIKPYIPYSDSIPDALGGFAADEPEVLDV
NFSQQAQSKLSGHPQARHIIQVIKEVLGQDPRPAYKKGKPDNKEYAVNLFDLNVKFVVETLFINVTDIERF
>Mature_231_residues
MYTIEPVGFIESPYKEKFAVPRQPRLVPTSTSRVRLVEAANCLESVRNIEQFSHVWLLFLFDKNLEAGWKPTVRPPRLGG
NERIGVFASRATFRPNGIGMSAVELKGVSQEKGQTWLDLGSVDLVDGTPIIDIKPYIPYSDSIPDALGGFAADEPEVLDV
NFSQQAQSKLSGHPQARHIIQVIKEVLGQDPRPAYKKGKPDNKEYAVNLFDLNVKFVVETLFINVTDIERF

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=141, Percent_Identity=42.5531914893617, Blast_Score=112, Evalue=2e-25,
Organism=Escherichia coli, GI1786393, Length=233, Percent_Identity=50.2145922746781, Blast_Score=236, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24586408, Length=139, Percent_Identity=40.2877697841727, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI45552503, Length=139, Percent_Identity=40.2877697841727, Blast_Score=101, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 25869; Mature: 25869

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIEPVGFIESPYKEKFAVPRQPRLVPTSTSRVRLVEAANCLESVRNIEQFSHVWLLFL
CEECCCCCCCCCCHHHHCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEE
FDKNLEAGWKPTVRPPRLGGNERIGVFASRATFRPNGIGMSAVELKGVSQEKGQTWLDLG
EECCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCEEEEECCCCHHCCCEEEECC
SVDLVDGTPIIDIKPYIPYSDSIPDALGGFAADEPEVLDVNFSQQAQSKLSGHPQARHII
CEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHH
QVIKEVLGQDPRPAYKKGKPDNKEYAVNLFDLNVKFVVETLFINVTDIERF
HHHHHHHCCCCCCHHHCCCCCCCEEEEEEEECCHHHEEEEHEEEEECCCCC
>Mature Secondary Structure
MYTIEPVGFIESPYKEKFAVPRQPRLVPTSTSRVRLVEAANCLESVRNIEQFSHVWLLFL
CEECCCCCCCCCCHHHHCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEE
FDKNLEAGWKPTVRPPRLGGNERIGVFASRATFRPNGIGMSAVELKGVSQEKGQTWLDLG
EECCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCEEEEECCCCHHCCCEEEECC
SVDLVDGTPIIDIKPYIPYSDSIPDALGGFAADEPEVLDVNFSQQAQSKLSGHPQARHII
CEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHH
QVIKEVLGQDPRPAYKKGKPDNKEYAVNLFDLNVKFVVETLFINVTDIERF
HHHHHHHCCCCCCHHHCCCCCCCEEEEEEEECCHHHEEEEHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]