| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yaiI [C]
Identifier: 218710328
GI number: 218710328
Start: 2531488
End: 2531931
Strand: Direct
Name: yaiI [C]
Synonym: VS_2364
Alternate gene names: 218710328
Gene position: 2531488-2531931 (Clockwise)
Preceding gene: 218710327
Following gene: 218710331
Centisome position: 76.73
GC content: 50.0
Gene sequence:
>444_bases ATGAAGATATGGGTTGATGCGGACGCTTGTCCAAAGGTTATCCGAGAAACAATCGTACGCGCAGCTGAGCGCACAGGGGT TGAATGTACCTTTGTGGCAAACCATCTGGTTCCCGTTCCTAAACGCAATAACATTCACTCAATTCAAGTGCCAAGCGGGT TTGATATTGCGGATGATGAAATCGTAAAGCGCACTGAACCCGGCGATCTTGTGATTACATCCGATATCCCTCTGGCTGAC GAAGTGATCACTAAAGGTGGGCAAGCCCTCAGCTCTCGTGGCGAGCTTTACACCAAAGAGACCATCAAAGCGCGTCTGAA CATTCGTGACTTTATGGATACCATGCGCTCAAGTGGCATCCAAACGGGTGGACCAAGTGCCCTTTCACAGACCGATCGTC GTGAGTTCGCGAATCACCTTGATCGCCTGCTAGCAAAGCGATAA
Upstream 100 bases:
>100_bases AGCAAATCCTTGAACTCACCGCTCGCGTTGCCATGCTTGAAGCTAAACTAACGGATCAATAAGGCAACTGAGCAATAAGC TAACAGAGAAATAGAACACT
Downstream 100 bases:
>100_bases TCATTAAGAAACATTGATATTCGTTCATAGCCATAACCGTGAACCTGTAGATATGTTTGTCGACATACTCCGTTCTTGTT ACTTAACACTTGATACTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKIWVDADACPKVIRETIVRAAERTGVECTFVANHLVPVPKRNNIHSIQVPSGFDIADDEIVKRTEPGDLVITSDIPLAD EVITKGGQALSSRGELYTKETIKARLNIRDFMDTMRSSGIQTGGPSALSQTDRREFANHLDRLLAKR
Sequences:
>Translated_147_residues MKIWVDADACPKVIRETIVRAAERTGVECTFVANHLVPVPKRNNIHSIQVPSGFDIADDEIVKRTEPGDLVITSDIPLAD EVITKGGQALSSRGELYTKETIKARLNIRDFMDTMRSSGIQTGGPSALSQTDRREFANHLDRLLAKR >Mature_147_residues MKIWVDADACPKVIRETIVRAAERTGVECTFVANHLVPVPKRNNIHSIQVPSGFDIADDEIVKRTEPGDLVITSDIPLAD EVITKGGQALSSRGELYTKETIKARLNIRDFMDTMRSSGIQTGGPSALSQTDRREFANHLDRLLAKR
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=142, Percent_Identity=58.4507042253521, Blast_Score=173, Evalue=4e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2364_VIBSL (B7VIS8)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002417949.1 - GeneID: 7161902 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2364 - HOGENOM: HBG363074 - OMA: PLASRCV - ProtClustDB: PRK00124 - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16285; Mature: 16285
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWVDADACPKVIRETIVRAAERTGVECTFVANHLVPVPKRNNIHSIQVPSGFDIADDE CEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCEECCCCCCCEEEEECCCCCCCCCHH IVKRTEPGDLVITSDIPLADEVITKGGQALSSRGELYTKETIKARLNIRDFMDTMRSSGI HHHCCCCCCEEEECCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCC QTGGPSALSQTDRREFANHLDRLLAKR CCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIWVDADACPKVIRETIVRAAERTGVECTFVANHLVPVPKRNNIHSIQVPSGFDIADDE CEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCEECCCCCCCEEEEECCCCCCCCCHH IVKRTEPGDLVITSDIPLADEVITKGGQALSSRGELYTKETIKARLNIRDFMDTMRSSGI HHHCCCCCCEEEECCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCC QTGGPSALSQTDRREFANHLDRLLAKR CCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA