Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is yfeX [H]

Identifier: 218710262

GI number: 218710262

Start: 2467652

End: 2468575

Strand: Reverse

Name: yfeX [H]

Synonym: VS_2295

Alternate gene names: 218710262

Gene position: 2468575-2467652 (Counterclockwise)

Preceding gene: 218710263

Following gene: 218710261

Centisome position: 74.82

GC content: 45.67

Gene sequence:

>924_bases
ATGCTTAATGTTTCAAATGAGCAGCCTAACGTTCAAAGTGCTATTTTGCCTGAAGCTGGGCCTTTCGCTCTTTACGTTCA
ACTTAAAGTGAACGCTAATACTGCTAATGTACTAGCAGAAATTCAAAAGCTTCCGACTCTAATCGACGAGCTAAACCAAA
CTCAACCTGATGCGAACCTAACGGCGTCGGTAGCATTCTCAAAAGCTTTTTGGGATAAGTTTGAGCAAGCTGCTCCCTCT
GATCTAATTGATTTTCCTGCGCTTGGTGAAGGTGATATCACAGCACCGAGCACACTGTCTGATGTTCTGATTCACTGTCA
TTCAAACCGACATGACCTACACTTCTTCATCCTACGTAAATTGCTATCTGAAGTAGCGGCAGACGTTGAAGTAGTAGATG
AAACTTACGGTTACCGTTTCCTAGACTCACGTGACATGACCGATTTCGTTGATGGCACTGAAAACCCGAAAGACGCGCAG
CGTGCTGAAGTGGCGATTGTGCCTGAAGGTGAATTCGCAGGTGGTAGCTACGTAATGGTGCAACGTTTTGTGCATAACCT
GCCTGCTTGGAATAGATTAAACGTATCGGCACAAGAGAAAGTGGTTGGCCGTACCAAGCCAGATTCAATCGAGCTAGACG
ATGTTCCAGCGGCGTCTCACGTTGGCCGTGTGGATATCAAAGAAGAAGGCAAGGGCCTTAAAATTGTTCGTCATAGCCTA
CCTTACGGCACAGCAACAGGCGATCACGGTTTACTGTTCATCGCTTACTGTAATGTTCGTCATAATTTCGATGCGATGCT
AGAGAGTATGTACGGCGAAACAGATGGCAAAACAGACCAACTGCTTCGCTTTACTAAAGCCGTTACTGGCGCTTACTACT
TTGCTCCTTCAGCTGAGATGTTGAGTGCACTAACGATTAAGTAA

Upstream 100 bases:

>100_bases
GGGATTGCTTTAAAGTGGTTGAGCACGAAGACTGATTCTCATCAAAACATTTGTACCATTCACAATTATACTTAGAAGCT
AAAACTGGAAGGAATAATCT

Downstream 100 bases:

>100_bases
GTGCACTCAAATAGAATAAACAAAGGGAGCCTCATGGCTCCTTTTTTTTAAAGTTTTATATAAATAGGTCGATACAAGAG
CAATCGTAAGTTTTATTCAT

Product: melanin biosynthesis protein TyrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANLTASVAFSKAFWDKFEQAAPS
DLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRKLLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQ
RAEVAIVPEGEFAGGSYVMVQRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL
PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEMLSALTIK

Sequences:

>Translated_307_residues
MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANLTASVAFSKAFWDKFEQAAPS
DLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRKLLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQ
RAEVAIVPEGEFAGGSYVMVQRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL
PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEMLSALTIK
>Mature_307_residues
MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANLTASVAFSKAFWDKFEQAAPS
DLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRKLLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQ
RAEVAIVPEGEFAGGSYVMVQRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL
PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEMLSALTIK

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI87082102, Length=299, Percent_Identity=47.1571906354515, Blast_Score=264, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 33801; Mature: 33801

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANL
CCCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
TASVAFSKAFWDKFEQAAPSDLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRK
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
LLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQRAEVAIVPEGEFAGGSYVMV
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHCEEEEEECCCCCCCHHHHH
QRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL
HHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCEEECCCCCCEEEEEECC
PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEM
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCHHH
LSALTIK
HHHHCCC
>Mature Secondary Structure
MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANL
CCCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
TASVAFSKAFWDKFEQAAPSDLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRK
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
LLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQRAEVAIVPEGEFAGGSYVMV
HHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHCEEEEEECCCCCCCHHHHH
QRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL
HHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCEEECCCCCCEEEEEECC
PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEM
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCHHH
LSALTIK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]