| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is pgm [H]
Identifier: 218710219
GI number: 218710219
Start: 2420071
End: 2421726
Strand: Reverse
Name: pgm [H]
Synonym: VS_2252
Alternate gene names: 218710219
Gene position: 2421726-2420071 (Counterclockwise)
Preceding gene: 218710220
Following gene: 218710217
Centisome position: 73.4
GC content: 46.74
Gene sequence:
>1656_bases ATGTCGATAATGGCTATGCACCCTCGTGCCGGGCAGAAAGCTCTGCAGGAAGATCTTCATAATATCCCGGCTTTAGTTGC AAACTATTTCTTACAGCAACCGGATGCTACTAACCCAGATCATAAAGTACTGTTCGGCACTTCAGGTCACCGCGGTACAG CAGACAAATCAACATTTAATGAAAACCACATTCTAGCGATCGCACAAGCGGTTGCTGAGGTTCGTGCCGATCAAGGTACA ACAGGCCCACTTTTCTTAGGCAAAGATACTCACGCTCTATCTGAGCCTGCTTTTTCTACGGTTATTGAAGTGCTAGTTGC AAACGGCGTTGAAGTTATCGTTCAAGAAAACAATGGCTTTACTCCAACTCCAGGTATCTCGCACGCGATTCTTACGCACA ATCTAGTGAATGATAAAAAAGCTGACGGCATTGTTATCACGCCTTCACATAACCCACCTCAAGACGGGGGCATTAAATAC AACCCGACACACGGTGGCCCTGCTGAAGCTGAACTGACTCAAGCGATTGAAGATCGTGCGAATGTGATCATTGCTGAGCA AATGCAAGGCGTTAAGCGCACTCCTATCGCACAGGCTAAACAGTCTGAGCTAGTGAAAGAAGTTGATTTAGTTGCTCCTT ACGTTGCTGACTTGGTTAACGTGGTTGATATGGAAGCAATCCAGAAAGCAAACATCAAGATTGGTGTTGATCCACTGGGT GGTAGCGGTATTGATTACTGGCGTCAAATTGGCAAAGCGTACAACCTAGACCTGACTCTGGTCAGTGAAGCTGTTGATCC TTCGTTCCAATTTATGTCTCTAGACAAAGATGGTGTGGTTCGTATGGACTGTTCTTCTCCATACGCAATGGCAGGTTTAC TAGCACTTAAAGACGACTATCAATTAGCGTTTGGCAACGACCCAGACTACGATCGCCACGGCATTGTTACGCCAAAAGGC TTGATGAATCCCAACCACTTCCTAGCGGTGTGTATTGACTACTTATACCGCAACCGTGAAGGTTGGGGTAAAGACGTTGC AGTGGGTAAAACACTGGTATCAAGTGCTCTGATTGACCGCGTTGTTGCTGACTTAGGTCGCGAGCTTTGCGAAGTGCCAG TGGGATTCAAATGGTTCGTTGATGGCCTATATAACGGTCAGTTTGGTTTCGGTGGTGAAGAGAGTGCGGGTGCGTCTTTC TTACGTAAAGACGGAACGCCTTGGTCAACAGATAAAGATGGCCTGATTCTTTGCCTACTTGCGGCCGAAATCACAGCAGT AACGGGCAAGAACCCACAAGAATACTACGAAGAACTTGCCGCTAAACATGGCGAATCTAAGTACAACCGTATTCAAGCAG TAGCTAACGGCGCACAAAAAGACGTGCTTAAGAAGCTATCTCCAGAGATGGTTTCAGCTGAGACGCTTGCTGGTGATGCA ATTACTGCACGCTTAACGCACGCTCCAGGTAATGGTGCTGCGATTGGTGGCCTAAAAGTGACGACTGAAAACGGTTGGTT TGCCGCTCGTCCATCAGGTACTGAAGACATCTATAAGATCTACTGTGAAAGCTTTAAAGGCGAAGAGCACCTAAAAGCAA TCGAAGCAGAAGCTCAAGAGATTGTTAATCAAGTATTTGCAGCCGCTGGCCTATAA
Upstream 100 bases:
>100_bases AAGTAACAGGTTCAATTTAACGAAATCTGATTTAAACCTCATAATATCCATGGCTAAGAAGATATTATGAGGTTTTTTTG TTTTTAAATTTTATATAAGG
Downstream 100 bases:
>100_bases TCGAATACAGATTAGTAGAGTTACAAGGTAAATAGTGAAAGGGTTGATGTGAAAGCATCAGCCCTTTTTTATAGTTTGTG GATAAAGCGGCTAGGACTAA
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MSIMAMHPRAGQKALQEDLHNIPALVANYFLQQPDATNPDHKVLFGTSGHRGTADKSTFNENHILAIAQAVAEVRADQGT TGPLFLGKDTHALSEPAFSTVIEVLVANGVEVIVQENNGFTPTPGISHAILTHNLVNDKKADGIVITPSHNPPQDGGIKY NPTHGGPAEAELTQAIEDRANVIIAEQMQGVKRTPIAQAKQSELVKEVDLVAPYVADLVNVVDMEAIQKANIKIGVDPLG GSGIDYWRQIGKAYNLDLTLVSEAVDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDDYQLAFGNDPDYDRHGIVTPKG LMNPNHFLAVCIDYLYRNREGWGKDVAVGKTLVSSALIDRVVADLGRELCEVPVGFKWFVDGLYNGQFGFGGEESAGASF LRKDGTPWSTDKDGLILCLLAAEITAVTGKNPQEYYEELAAKHGESKYNRIQAVANGAQKDVLKKLSPEMVSAETLAGDA ITARLTHAPGNGAAIGGLKVTTENGWFAARPSGTEDIYKIYCESFKGEEHLKAIEAEAQEIVNQVFAAAGL
Sequences:
>Translated_551_residues MSIMAMHPRAGQKALQEDLHNIPALVANYFLQQPDATNPDHKVLFGTSGHRGTADKSTFNENHILAIAQAVAEVRADQGT TGPLFLGKDTHALSEPAFSTVIEVLVANGVEVIVQENNGFTPTPGISHAILTHNLVNDKKADGIVITPSHNPPQDGGIKY NPTHGGPAEAELTQAIEDRANVIIAEQMQGVKRTPIAQAKQSELVKEVDLVAPYVADLVNVVDMEAIQKANIKIGVDPLG GSGIDYWRQIGKAYNLDLTLVSEAVDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDDYQLAFGNDPDYDRHGIVTPKG LMNPNHFLAVCIDYLYRNREGWGKDVAVGKTLVSSALIDRVVADLGRELCEVPVGFKWFVDGLYNGQFGFGGEESAGASF LRKDGTPWSTDKDGLILCLLAAEITAVTGKNPQEYYEELAAKHGESKYNRIQAVANGAQKDVLKKLSPEMVSAETLAGDA ITARLTHAPGNGAAIGGLKVTTENGWFAARPSGTEDIYKIYCESFKGEEHLKAIEAEAQEIVNQVFAAAGL >Mature_550_residues SIMAMHPRAGQKALQEDLHNIPALVANYFLQQPDATNPDHKVLFGTSGHRGTADKSTFNENHILAIAQAVAEVRADQGTT GPLFLGKDTHALSEPAFSTVIEVLVANGVEVIVQENNGFTPTPGISHAILTHNLVNDKKADGIVITPSHNPPQDGGIKYN PTHGGPAEAELTQAIEDRANVIIAEQMQGVKRTPIAQAKQSELVKEVDLVAPYVADLVNVVDMEAIQKANIKIGVDPLGG SGIDYWRQIGKAYNLDLTLVSEAVDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDDYQLAFGNDPDYDRHGIVTPKGL MNPNHFLAVCIDYLYRNREGWGKDVAVGKTLVSSALIDRVVADLGRELCEVPVGFKWFVDGLYNGQFGFGGEESAGASFL RKDGTPWSTDKDGLILCLLAAEITAVTGKNPQEYYEELAAKHGESKYNRIQAVANGAQKDVLKKLSPEMVSAETLAGDAI TARLTHAPGNGAAIGGLKVTTENGWFAARPSGTEDIYKIYCESFKGEEHLKAIEAEAQEIVNQVFAAAGL
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=453, Percent_Identity=25.8278145695364, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI290463102, Length=468, Percent_Identity=26.7094017094017, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI21361621, Length=458, Percent_Identity=25.9825327510917, Blast_Score=84, Evalue=4e-16, Organism=Escherichia coli, GI1786904, Length=546, Percent_Identity=70.1465201465201, Blast_Score=789, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323752, Length=557, Percent_Identity=25.8527827648115, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6322722, Length=443, Percent_Identity=27.765237020316, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI17864244, Length=444, Percent_Identity=27.2522522522523, Blast_Score=103, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59277; Mature: 59145
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMAMHPRAGQKALQEDLHNIPALVANYFLQQPDATNPDHKVLFGTSGHRGTADKSTFN CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCC ENHILAIAQAVAEVRADQGTTGPLFLGKDTHALSEPAFSTVIEVLVANGVEVIVQENNGF CCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCC TPTPGISHAILTHNLVNDKKADGIVITPSHNPPQDGGIKYNPTHGGPAEAELTQAIEDRA CCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH NVIIAEQMQGVKRTPIAQAKQSELVKEVDLVAPYVADLVNVVDMEAIQKANIKIGVDPLG CEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC GSGIDYWRQIGKAYNLDLTLVSEAVDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDDY CCCHHHHHHHCCCCCCEEEEEHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHEECCCC QLAFGNDPDYDRHGIVTPKGLMNPNHFLAVCIDYLYRNREGWGKDVAVGKTLVSSALIDR EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VVADLGRELCEVPVGFKWFVDGLYNGQFGFGGEESAGASFLRKDGTPWSTDKDGLILCLL HHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEE AAEITAVTGKNPQEYYEELAAKHGESKYNRIQAVANGAQKDVLKKLSPEMVSAETLAGDA HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCC ITARLTHAPGNGAAIGGLKVTTENGWFAARPSGTEDIYKIYCESFKGEEHLKAIEAEAQE EEEEEEECCCCCEEECCEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH IVNQVFAAAGL HHHHHHHHCCC >Mature Secondary Structure SIMAMHPRAGQKALQEDLHNIPALVANYFLQQPDATNPDHKVLFGTSGHRGTADKSTFN CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCC ENHILAIAQAVAEVRADQGTTGPLFLGKDTHALSEPAFSTVIEVLVANGVEVIVQENNGF CCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCC TPTPGISHAILTHNLVNDKKADGIVITPSHNPPQDGGIKYNPTHGGPAEAELTQAIEDRA CCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH NVIIAEQMQGVKRTPIAQAKQSELVKEVDLVAPYVADLVNVVDMEAIQKANIKIGVDPLG CEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC GSGIDYWRQIGKAYNLDLTLVSEAVDPSFQFMSLDKDGVVRMDCSSPYAMAGLLALKDDY CCCHHHHHHHCCCCCCEEEEEHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHEECCCC QLAFGNDPDYDRHGIVTPKGLMNPNHFLAVCIDYLYRNREGWGKDVAVGKTLVSSALIDR EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VVADLGRELCEVPVGFKWFVDGLYNGQFGFGGEESAGASFLRKDGTPWSTDKDGLILCLL HHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEE AAEITAVTGKNPQEYYEELAAKHGESKYNRIQAVANGAQKDVLKKLSPEMVSAETLAGDA HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCC ITARLTHAPGNGAAIGGLKVTTENGWFAARPSGTEDIYKIYCESFKGEEHLKAIEAEAQE EEEEEEECCCCCEEECCEEEEECCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH IVNQVFAAAGL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503; 8011018 [H]