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The map label for this gene is ybgI [C]

Identifier: 218710217

GI number: 218710217

Start: 2418326

End: 2419084

Strand: Reverse

Name: ybgI [C]

Synonym: VS_2250

Alternate gene names: 218710217

Gene position: 2419084-2418326 (Counterclockwise)

Preceding gene: 218710219

Following gene: 218710215

Centisome position: 73.32

GC content: 45.59

Gene sequence:

>759_bases
ATGAATAACTTACAATTAGAAAAGCTACTTAACGAAAAACTGCAGCCACAGCAAATTAAAGATTACTGTCCTAATGGTCT
TCAAGTTGAAGGCGCAACAGAAGTGAAGCGAATCGTTACTGGTGTGACAGCTTCTCAAGCCTTGATTGATAAAGCGGTAG
AACTGAACGCAGACGCGTTATTAGTGCATCATGGCTTTTTCTGGAAAGGCGAGTCAGAAGCGATTCGTGGCATGAAGGGC
AAGCGCATTCGTACCCTGATTAAAAACGACATCAACCTTTTGGGTTACCACTTGCCTCTTGATATTCACCCTGAGTTAGG
CAACAACGCCAAGCTTGCTGAGTTGCTTGATATCGAAGTCGAAGGCGGTTTAGAAGGGCACCCACAATCTGTTGCGATGT
TTGGCAAGTTGAGTGCGCCAATGACCGGTTCAGAGTTCGCAGAAAAGATTGGCCAAGCTTTGAACCGCAAGCCATTACAC
ATTGCTCCAGAGAACCAAGACAAAATGATTACGACTGTCGGTTGGTGCACCGGTGGTGGTCAAGATTACATTGAGTTAGC
GGCTTCTCAAGGTATTGATGCATTTATCTCTGGTGAAATTTCAGAGCGCACAACTTACTCAGCACGTGAACAAGACATTC
ATTACTTTGCCGCAGGCCACCACGCAACAGAACGTTATGGTGTGAAGGCATTAGGTGAGTGGCTAGCGAAAGAGCATGGC
TTAGCTGTTGAGTTTATCGATATCGACAACCCGGTATAA

Upstream 100 bases:

>100_bases
CTCATAAACTAGCTCTTTATAAACATAACCCTGGGGCTTTCGACATTCTACCCGTAAATTGATATAACGACGTTATTATA
AAGGTAAGCTGGAAATAAAA

Downstream 100 bases:

>100_bases
AAAGAAAATATGGGATGTAGGATACGAGTCACTATAAATTTGTACCCGTCGATGAGACTGGCTAGTTAGAACTCTAATGG
ATTTTATTTCGAGAGATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNNLQLEKLLNEKLQPQQIKDYCPNGLQVEGATEVKRIVTGVTASQALIDKAVELNADALLVHHGFFWKGESEAIRGMKG
KRIRTLIKNDINLLGYHLPLDIHPELGNNAKLAELLDIEVEGGLEGHPQSVAMFGKLSAPMTGSEFAEKIGQALNRKPLH
IAPENQDKMITTVGWCTGGGQDYIELAASQGIDAFISGEISERTTYSAREQDIHYFAAGHHATERYGVKALGEWLAKEHG
LAVEFIDIDNPV

Sequences:

>Translated_252_residues
MNNLQLEKLLNEKLQPQQIKDYCPNGLQVEGATEVKRIVTGVTASQALIDKAVELNADALLVHHGFFWKGESEAIRGMKG
KRIRTLIKNDINLLGYHLPLDIHPELGNNAKLAELLDIEVEGGLEGHPQSVAMFGKLSAPMTGSEFAEKIGQALNRKPLH
IAPENQDKMITTVGWCTGGGQDYIELAASQGIDAFISGEISERTTYSAREQDIHYFAAGHHATERYGVKALGEWLAKEHG
LAVEFIDIDNPV
>Mature_252_residues
MNNLQLEKLLNEKLQPQQIKDYCPNGLQVEGATEVKRIVTGVTASQALIDKAVELNADALLVHHGFFWKGESEAIRGMKG
KRIRTLIKNDINLLGYHLPLDIHPELGNNAKLAELLDIEVEGGLEGHPQSVAMFGKLSAPMTGSEFAEKIGQALNRKPLH
IAPENQDKMITTVGWCTGGGQDYIELAASQGIDAFISGEISERTTYSAREQDIHYFAAGHHATERYGVKALGEWLAKEHG
LAVEFIDIDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=58.1673306772908, Blast_Score=294, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27675; Mature: 27675

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLQLEKLLNEKLQPQQIKDYCPNGLQVEGATEVKRIVTGVTASQALIDKAVELNADAL
CCCCHHHHHHHHCCCHHHHHHHCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
LVHHGFFWKGESEAIRGMKGKRIRTLIKNDINLLGYHLPLDIHPELGNNAKLAELLDIEV
EEECCEEECCCHHHHCCCCCHHHHHHHHCCHHEEEEECCEEECCCCCCCCCEEEEEEEEE
EGGLEGHPQSVAMFGKLSAPMTGSEFAEKIGQALNRKPLHIAPENQDKMITTVGWCTGGG
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEEEECCCC
QDYIELAASQGIDAFISGEISERTTYSAREQDIHYFAAGHHATERYGVKALGEWLAKEHG
HHHHHHHHHCCCCEEECCCCCCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
LAVEFIDIDNPV
CEEEEEECCCCC
>Mature Secondary Structure
MNNLQLEKLLNEKLQPQQIKDYCPNGLQVEGATEVKRIVTGVTASQALIDKAVELNADAL
CCCCHHHHHHHHCCCHHHHHHHCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
LVHHGFFWKGESEAIRGMKGKRIRTLIKNDINLLGYHLPLDIHPELGNNAKLAELLDIEV
EEECCEEECCCHHHHCCCCCHHHHHHHHCCHHEEEEECCEEECCCCCCCCCEEEEEEEEE
EGGLEGHPQSVAMFGKLSAPMTGSEFAEKIGQALNRKPLHIAPENQDKMITTVGWCTGGG
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEEEECCCC
QDYIELAASQGIDAFISGEISERTTYSAREQDIHYFAAGHHATERYGVKALGEWLAKEHG
HHHHHHHHHCCCCEEECCCCCCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
LAVEFIDIDNPV
CEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]