| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is hisD [H]
Identifier: 218710006
GI number: 218710006
Start: 2170697
End: 2172016
Strand: Reverse
Name: hisD [H]
Synonym: VS_2025
Alternate gene names: 218710006
Gene position: 2172016-2170697 (Counterclockwise)
Preceding gene: 218710007
Following gene: 218710005
Centisome position: 65.83
GC content: 47.27
Gene sequence:
>1320_bases GTGACGATGAGAACCGTTGTTTGGCAATCTTTAAGTGAATCACAGCAAGACTCGGTATTAGAGCGTCCAGCTATTACTGA AGGTGCAAACATCACAGCGACTGTTTCTGATGTTATTGCAAAAGTACGAAATGAAGGCGATGCCGCACTTAAGGAACTGA CTGAAAAGTTTGATGGTGTGACTCCAGAATCTATCCGAGTTAGTTCGGGTGAGATCGAAGAGGCATGTGCTCGTCTAACA CCAGAGATGAAGCAAGCGTTGGAGCAAGCTTACAGCAACATTGCTAAGTTTCATGAAGCTCAAAAGCCACAGCCAATTAA GGTTGAAACACAGCCTGGTGTTGTGTGTGAGCAGGTGACGCGCGCGATTAATACTGTTGGACTTTATATTCCGGGGGGCA GTGCGCCACTTCCGTCAACGGTTCTTATGTTAGGTGTACCTGCTCAAATTGCGGGTTGTCGTAAGGTTGTGCTTTGCTCA CCTCCGCCCATCGCGGATGAAATCTTGTATGTCACTAATCTTTGTAAAATCGATGAGGTTTACAATGTTGGTGGTGGTCA AGCCGTTGCTGCCATGGCTTACGGGACCGAGAGCGTTGCTAAGGTTGATAAGATCTTCGGCCCAGGTAACGCTTACGTAA CGGAAGCTAAACGCCAAGTAAGTAACGACTTCCGTGGCGCTGCGATTGATATGCCTGCTGGCCCGTCTGAAGTGTTAGTG ATTGCAGACGAAACTGCGGATGCTGACTTCATTGCTGCTGATCTACTGAGCCAAGCTGAACACGGGCCAGATTCACAGGT TGTATTAGTAACACCATCACCAGTTATTGCCGACCAAGTAACCGATGCAGTTCAGAAGCAACTGAAAGAGCTGTCTCGTG CGAACATCGCTCAGCAAGCATTGGCTTCAAGTCTAATCATCATTGCTGAATCGATCACTCAAGCGATTGCGATTTCGAAT TTCTATGGTCCTGAGCACTTGATTGTTCAGACCAAGAGTCCACGAGAATTACTGCCGTTACTAGACAATGCTGGTTCAAT CTTCTTGGGTGACTGGTCTCCAGAATCTGCAGGTGACTACGCATCAGGCACAAACCACGTTCTTCCGACTTACGGCTATA CCAAGACTTATTCAAGCCTAGGTTTGGCGGATTTCTCTAAGCGTATGACGGTACAAGAGTTAACAGCTGATGGCTTACAA GGCCTAGCGCCAACGGTAGTCACAATGGCGGAAGCCGAAGGTTTGGACGCACACAAACGTGCGGTGACCATCCGAGTTGA AAAATTAAATCGATTTGAACAGCTAAATAAAGCGAAATAA
Upstream 100 bases:
>100_bases TCGTAAGTACAGAGAACTTGTTCTGGGAAACTATGGAACAGCTGAAAGAGTTGGGTGCAAGCTCGATTCTAGTATTACCA ATCGAAAAAATGATGGGGTA
Downstream 100 bases:
>100_bases GGGTAGGGCATGGAAAAGTTAGCAAGAAAACAAGTTCAGGCTCTAACACCTTACTTGTCTGCAAGACGAATTGGTGGCAG CGGAGATGTATGGTTGAACG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTMRTVVWQSLSESQQDSVLERPAITEGANITATVSDVIAKVRNEGDAALKELTEKFDGVTPESIRVSSGEIEEACARLT PEMKQALEQAYSNIAKFHEAQKPQPIKVETQPGVVCEQVTRAINTVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCS PPPIADEILYVTNLCKIDEVYNVGGGQAVAAMAYGTESVAKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLV IADETADADFIAADLLSQAEHGPDSQVVLVTPSPVIADQVTDAVQKQLKELSRANIAQQALASSLIIIAESITQAIAISN FYGPEHLIVQTKSPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTADGLQ GLAPTVVTMAEAEGLDAHKRAVTIRVEKLNRFEQLNKAK
Sequences:
>Translated_439_residues MTMRTVVWQSLSESQQDSVLERPAITEGANITATVSDVIAKVRNEGDAALKELTEKFDGVTPESIRVSSGEIEEACARLT PEMKQALEQAYSNIAKFHEAQKPQPIKVETQPGVVCEQVTRAINTVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCS PPPIADEILYVTNLCKIDEVYNVGGGQAVAAMAYGTESVAKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLV IADETADADFIAADLLSQAEHGPDSQVVLVTPSPVIADQVTDAVQKQLKELSRANIAQQALASSLIIIAESITQAIAISN FYGPEHLIVQTKSPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTADGLQ GLAPTVVTMAEAEGLDAHKRAVTIRVEKLNRFEQLNKAK >Mature_438_residues TMRTVVWQSLSESQQDSVLERPAITEGANITATVSDVIAKVRNEGDAALKELTEKFDGVTPESIRVSSGEIEEACARLTP EMKQALEQAYSNIAKFHEAQKPQPIKVETQPGVVCEQVTRAINTVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSP PPIADEILYVTNLCKIDEVYNVGGGQAVAAMAYGTESVAKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVI ADETADADFIAADLLSQAEHGPDSQVVLVTPSPVIADQVTDAVQKQLKELSRANIAQQALASSLIIIAESITQAIAISNF YGPEHLIVQTKSPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTADGLQG LAPTVVTMAEAEGLDAHKRAVTIRVEKLNRFEQLNKAK
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=431, Percent_Identity=62.877030162413, Blast_Score=557, Evalue=1e-160, Organism=Saccharomyces cerevisiae, GI6319819, Length=419, Percent_Identity=50.3579952267303, Blast_Score=404, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46821; Mature: 46689
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRTVVWQSLSESQQDSVLERPAITEGANITATVSDVIAKVRNEGDAALKELTEKFDGV CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCC TPESIRVSSGEIEEACARLTPEMKQALEQAYSNIAKFHEAQKPQPIKVETQPGVVCEQVT CCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH RAINTVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVTNLCKIDEV HHHHHCEEEECCCCCCCCCCEEEECCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH YNVGGGQAVAAMAYGTESVAKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLV HCCCCCCEEEHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEE IADETADADFIAADLLSQAEHGPDSQVVLVTPSPVIADQVTDAVQKQLKELSRANIAQQA EEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LASSLIIIAESITQAIAISNFYGPEHLIVQTKSPRELLPLLDNAGSIFLGDWSPESAGDY HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCC ASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTADGLQGLAPTVVTMAEAEGLDAHKR CCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH AVTIRVEKLNRFEQLNKAK EEEEEHHHHHHHHHHHCCC >Mature Secondary Structure TMRTVVWQSLSESQQDSVLERPAITEGANITATVSDVIAKVRNEGDAALKELTEKFDGV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCC TPESIRVSSGEIEEACARLTPEMKQALEQAYSNIAKFHEAQKPQPIKVETQPGVVCEQVT CCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH RAINTVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVTNLCKIDEV HHHHHCEEEECCCCCCCCCCEEEECCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH YNVGGGQAVAAMAYGTESVAKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLV HCCCCCCEEEHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEE IADETADADFIAADLLSQAEHGPDSQVVLVTPSPVIADQVTDAVQKQLKELSRANIAQQA EEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LASSLIIIAESITQAIAISNFYGPEHLIVQTKSPRELLPLLDNAGSIFLGDWSPESAGDY HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCC ASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTADGLQGLAPTVVTMAEAEGLDAHKR CCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH AVTIRVEKLNRFEQLNKAK EEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]