Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709990

Identifier: 218709990

GI number: 218709990

Start: 2156240

End: 2157544

Strand: Reverse

Name: 218709990

Synonym: VS_2009

Alternate gene names: NA

Gene position: 2157544-2156240 (Counterclockwise)

Preceding gene: 218709994

Following gene: 218709989

Centisome position: 65.39

GC content: 42.22

Gene sequence:

>1305_bases
GTGAGAGTGAACAAAGTAGCATTAACGATCAGTATGCTATTTGCTATCTCAGGTTGTCAAAGTACACCCTCAGAGCAGAC
AGGCGCGAACCAAACCACAAATGACAATGAATCAACAGTAGAGGTCCGTTCATTTCAGTCTGTCCAAAGTGTTTACTCCG
AGTGGGAGGCTAAGCTTGAAGAACACGCTCAATTGTCTCTCTATGCTCCAGAGAATTACAATGAACTATTAGACGCTTGG
GATGATGCTGAAAGCATTTATGCGGACTTACTGAAAGATCAAACACGGTTAACCAAGAGTTACTCGATTTTTTCGACATT
AACTTACGCTGAAGCCTTTGATGAAAAAATCGCGTTGATTCGATCAAATTATGACTCGATCTTAGTGCTAAAGGAAAAGG
CTGACAGAGTATTAGCCGACTCGATAGTGCAAATGGATTACTTAAAGTTTCTTGGTGCCGACACTATGTTTGCATCGAGC
TACAAGCGCTTGTATTCAGAATACAGCGAGCTGTTTGAGTATGTGCTGGTCGACGAACTTGAAGATGCTCAGGAAGCACA
GGTAGAGTTTCTTAATAACGCGAGTTTGTTAGAAGTTAAAGTGGCCCACAAGAAGTACATCGAACCTTTGAAGGATGAGT
TGGAGTTCTTGGAAGATGAAGATTTCGATGACGTTGTTCCACTGACGTTTGCTAAAGCGGCATCTCAAATTGCTTTGGCA
GAAAGCCAAGTGAAAGCTAGTCCCCGTGAAAAGTCGATCATTGAAGACGCAGTTCACGCTGCGGAGTTCGAATTAAACCA
CGTACGCAGTGTTGCTCATGAAGTCAAAGTACTAGCGAGCGTAAAAGGCGACCAGTTCGAACAGTCGGTTTTGAATGCAG
AGAACCAGTTATTGAGCATTTCACGAGTGGTTAATGATGAAGATCACCGTGATGTTGTATTGCGTCTTCAGTCTCAAAAA
ATTGTAGCGAGTGTTAAAGCGCTGAAAGGCTCAGACATGACGGCGTCATTAAAGTCAGATATTAAAACTTTGACTGAGCG
ACTCGCTAAGTTAGAAAGTGATAATCAGAAACAAACACAGAAATTGGTTGAAGCGACCAAGCACAACCAATTGTTAGATG
AGCAGATTACCAAGAGTGATGCTCACATAAAGAGCCTAGAAGAGTTAGTGGATAGTTTGAAAAGCTTAGGTGGTAAAGTT
GCCACCGAAAGTGACTCTGATGTGATTCTTCCTAGTATTGAATCTAGCCTAGAGGATGCATCTCTCGAACAATCATTAGA
AGAAGTGATTGAACCTTCGGTTTAG

Upstream 100 bases:

>100_bases
TTAAATTCTGAACGATGTTTATTGGGAAGTGGTTGTAATATATTGTGTTACTAGAAATATATTGCATACAGCTAATATTG
TATAAAAAGGAAACGCATTA

Downstream 100 bases:

>100_bases
CATCACTAATTTCTTTATTTGTGATTGAGTTAAAAGCGCCTAAGGGCGCTTTTTTACGTTCTGTTGATCTATGTCAAAAT
CTGGAAACAAAAGCGCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MRVNKVALTISMLFAISGCQSTPSEQTGANQTTNDNESTVEVRSFQSVQSVYSEWEAKLEEHAQLSLYAPENYNELLDAW
DDAESIYADLLKDQTRLTKSYSIFSTLTYAEAFDEKIALIRSNYDSILVLKEKADRVLADSIVQMDYLKFLGADTMFASS
YKRLYSEYSELFEYVLVDELEDAQEAQVEFLNNASLLEVKVAHKKYIEPLKDELEFLEDEDFDDVVPLTFAKAASQIALA
ESQVKASPREKSIIEDAVHAAEFELNHVRSVAHEVKVLASVKGDQFEQSVLNAENQLLSISRVVNDEDHRDVVLRLQSQK
IVASVKALKGSDMTASLKSDIKTLTERLAKLESDNQKQTQKLVEATKHNQLLDEQITKSDAHIKSLEELVDSLKSLGGKV
ATESDSDVILPSIESSLEDASLEQSLEEVIEPSV

Sequences:

>Translated_434_residues
MRVNKVALTISMLFAISGCQSTPSEQTGANQTTNDNESTVEVRSFQSVQSVYSEWEAKLEEHAQLSLYAPENYNELLDAW
DDAESIYADLLKDQTRLTKSYSIFSTLTYAEAFDEKIALIRSNYDSILVLKEKADRVLADSIVQMDYLKFLGADTMFASS
YKRLYSEYSELFEYVLVDELEDAQEAQVEFLNNASLLEVKVAHKKYIEPLKDELEFLEDEDFDDVVPLTFAKAASQIALA
ESQVKASPREKSIIEDAVHAAEFELNHVRSVAHEVKVLASVKGDQFEQSVLNAENQLLSISRVVNDEDHRDVVLRLQSQK
IVASVKALKGSDMTASLKSDIKTLTERLAKLESDNQKQTQKLVEATKHNQLLDEQITKSDAHIKSLEELVDSLKSLGGKV
ATESDSDVILPSIESSLEDASLEQSLEEVIEPSV
>Mature_434_residues
MRVNKVALTISMLFAISGCQSTPSEQTGANQTTNDNESTVEVRSFQSVQSVYSEWEAKLEEHAQLSLYAPENYNELLDAW
DDAESIYADLLKDQTRLTKSYSIFSTLTYAEAFDEKIALIRSNYDSILVLKEKADRVLADSIVQMDYLKFLGADTMFASS
YKRLYSEYSELFEYVLVDELEDAQEAQVEFLNNASLLEVKVAHKKYIEPLKDELEFLEDEDFDDVVPLTFAKAASQIALA
ESQVKASPREKSIIEDAVHAAEFELNHVRSVAHEVKVLASVKGDQFEQSVLNAENQLLSISRVVNDEDHRDVVLRLQSQK
IVASVKALKGSDMTASLKSDIKTLTERLAKLESDNQKQTQKLVEATKHNQLLDEQITKSDAHIKSLEELVDSLKSLGGKV
ATESDSDVILPSIESSLEDASLEQSLEEVIEPSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48610; Mature: 48610

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVNKVALTISMLFAISGCQSTPSEQTGANQTTNDNESTVEVRSFQSVQSVYSEWEAKLE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHAQLSLYAPENYNELLDAWDDAESIYADLLKDQTRLTKSYSIFSTLTYAEAFDEKIALI
HCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSNYDSILVLKEKADRVLADSIVQMDYLKFLGADTMFASSYKRLYSEYSELFEYVLVDEL
HCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAQEAQVEFLNNASLLEVKVAHKKYIEPLKDELEFLEDEDFDDVVPLTFAKAASQIALA
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
ESQVKASPREKSIIEDAVHAAEFELNHVRSVAHEVKVLASVKGDQFEQSVLNAENQLLSI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SRVVNDEDHRDVVLRLQSQKIVASVKALKGSDMTASLKSDIKTLTERLAKLESDNQKQTQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
KLVEATKHNQLLDEQITKSDAHIKSLEELVDSLKSLGGKVATESDSDVILPSIESSLEDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCCHHHHHHHH
SLEQSLEEVIEPSV
HHHHHHHHHHCCCC
>Mature Secondary Structure
MRVNKVALTISMLFAISGCQSTPSEQTGANQTTNDNESTVEVRSFQSVQSVYSEWEAKLE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHAQLSLYAPENYNELLDAWDDAESIYADLLKDQTRLTKSYSIFSTLTYAEAFDEKIALI
HCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSNYDSILVLKEKADRVLADSIVQMDYLKFLGADTMFASSYKRLYSEYSELFEYVLVDEL
HCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDAQEAQVEFLNNASLLEVKVAHKKYIEPLKDELEFLEDEDFDDVVPLTFAKAASQIALA
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
ESQVKASPREKSIIEDAVHAAEFELNHVRSVAHEVKVLASVKGDQFEQSVLNAENQLLSI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SRVVNDEDHRDVVLRLQSQKIVASVKALKGSDMTASLKSDIKTLTERLAKLESDNQKQTQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
KLVEATKHNQLLDEQITKSDAHIKSLEELVDSLKSLGGKVATESDSDVILPSIESSLEDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCCHHHHHHHH
SLEQSLEEVIEPSV
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA