| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is folE [H]
Identifier: 218709738
GI number: 218709738
Start: 1871946
End: 1872584
Strand: Direct
Name: folE [H]
Synonym: VS_1750
Alternate gene names: 218709738
Gene position: 1871946-1872584 (Clockwise)
Preceding gene: 218709737
Following gene: 218709739
Centisome position: 56.74
GC content: 42.25
Gene sequence:
>639_bases ATGCTGAACACAGAAGCCGAAAAAGTAAGAGAAGCTTTGCTCGCAAGAGGACTTGAAACTCCAATGACACCGAGCGAAAT GAATCCCAACCAGAAGTACAACCGCATCAAGGGACTCTTAACAGAAGTTGTCAGTACGCTTGGACTGGATTTAAACGATG ACAGCCTTGCTGAAACACCTCATCGCATTGCAAAGATGTACGTCCATGAGATTTTTTCAGGGCTTGATTACGATAATTTC CCAAAAATCAGTGTTATAGAAAATAAAATGTCGGTTGATGAAATGGTTAAGGTATCGGATATCGACTTAACATCTACGTG CGAACATCACTTCATTACTATTGATGGTTTAGCGGAAGTGGCTTATATACCTGAAAACAAAATTCTTGGGCTGTCTAAAA TCAACCGTATCGTTCGATTCTTTGCTCAGCGTCCTCAGGTACAAGAACGCCTTACACAACAAATCTTGGTTGCGATACAG ACTCTCGTTGAAACAGAAAACGTGGCAGTGACGATTAAAGCGTCGCACTATTGCGTTAAATCCAGAGGCGTCATGGATGC AAACTCTGAAACCTCAACGACTGCACTCGGTGGCATTTTCAAAACTAACCCTCAAACCAGAGCTGAGTTTTTACGATGA
Upstream 100 bases:
>100_bases GTGAGAATCGACAAGCCTCATGCGCTACGTTTTGCTGACTCTGTTTCGCTCACTCTGAGCTATGAAGCAGACAACGACAA TATTTCATAAGGAGTGCGTC
Downstream 100 bases:
>100_bases GTGAAACAATCCTGATAACCGGCGTGGGAAAGCGACTCGGATTCGCACTGGCGCAGCAACTTTTAGCGGATGGATACAAT GTGGTTGGCACTTACCGCAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLNTEAEKVREALLARGLETPMTPSEMNPNQKYNRIKGLLTEVVSTLGLDLNDDSLAETPHRIAKMYVHEIFSGLDYDNF PKISVIENKMSVDEMVKVSDIDLTSTCEHHFITIDGLAEVAYIPENKILGLSKINRIVRFFAQRPQVQERLTQQILVAIQ TLVETENVAVTIKASHYCVKSRGVMDANSETSTTALGGIFKTNPQTRAEFLR
Sequences:
>Translated_212_residues MLNTEAEKVREALLARGLETPMTPSEMNPNQKYNRIKGLLTEVVSTLGLDLNDDSLAETPHRIAKMYVHEIFSGLDYDNF PKISVIENKMSVDEMVKVSDIDLTSTCEHHFITIDGLAEVAYIPENKILGLSKINRIVRFFAQRPQVQERLTQQILVAIQ TLVETENVAVTIKASHYCVKSRGVMDANSETSTTALGGIFKTNPQTRAEFLR >Mature_212_residues MLNTEAEKVREALLARGLETPMTPSEMNPNQKYNRIKGLLTEVVSTLGLDLNDDSLAETPHRIAKMYVHEIFSGLDYDNF PKISVIENKMSVDEMVKVSDIDLTSTCEHHFITIDGLAEVAYIPENKILGLSKINRIVRFFAQRPQVQERLTQQILVAIQ TLVETENVAVTIKASHYCVKSRGVMDANSETSTTALGGIFKTNPQTRAEFLR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=178, Percent_Identity=39.3258426966292, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI4503949, Length=178, Percent_Identity=39.3258426966292, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI66932970, Length=151, Percent_Identity=35.7615894039735, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI66932972, Length=142, Percent_Identity=37.3239436619718, Blast_Score=89, Evalue=3e-18, Organism=Escherichia coli, GI1788476, Length=213, Percent_Identity=68.5446009389671, Blast_Score=290, Evalue=5e-80, Organism=Caenorhabditis elegans, GI17560486, Length=171, Percent_Identity=42.6900584795322, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=39.5604395604396, Blast_Score=133, Evalue=2e-32, Organism=Drosophila melanogaster, GI24656782, Length=179, Percent_Identity=39.1061452513966, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24656791, Length=179, Percent_Identity=39.1061452513966, Blast_Score=121, Evalue=3e-28, Organism=Drosophila melanogaster, GI24656796, Length=179, Percent_Identity=39.1061452513966, Blast_Score=121, Evalue=3e-28,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 23797; Mature: 23797
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTEAEKVREALLARGLETPMTPSEMNPNQKYNRIKGLLTEVVSTLGLDLNDDSLAETP CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH HRIAKMYVHEIFSGLDYDNFPKISVIENKMSVDEMVKVSDIDLTSTCEHHFITIDGLAEV HHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCHHHHHHHCCCCCCCCCCCCEEEECCHHHH AYIPENKILGLSKINRIVRFFAQRPQVQERLTQQILVAIQTLVETENVAVTIKASHYCVK EECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEC SRGVMDANSETSTTALGGIFKTNPQTRAEFLR CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCC >Mature Secondary Structure MLNTEAEKVREALLARGLETPMTPSEMNPNQKYNRIKGLLTEVVSTLGLDLNDDSLAETP CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH HRIAKMYVHEIFSGLDYDNFPKISVIENKMSVDEMVKVSDIDLTSTCEHHFITIDGLAEV HHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCHHHHHHHCCCCCCCCCCCCEEEECCHHHH AYIPENKILGLSKINRIVRFFAQRPQVQERLTQQILVAIQTLVETENVAVTIKASHYCVK EECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEC SRGVMDANSETSTTALGGIFKTNPQTRAEFLR CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]