Click here to switch to the map view.

The map label for this gene is 218709617

Identifier: 218709617

GI number: 218709617

Start: 1745440

End: 1746012

Strand: Reverse

Name: 218709617

Synonym: VS_1627

Alternate gene names: NA

Gene position: 1746012-1745440 (Counterclockwise)

Preceding gene: 218709618

Following gene: 218709616

Centisome position: 52.92

GC content: 39.97

Gene sequence:

>573_bases
ATGCTTAAATCAACATATCTATTGGGCCTAGTTGGCTTGGTTTCACTTCCTACATTTGCTGCTGGTATCGAGGGTGGTCC
ATACATTGGTGCAGGCCTTGGTGTGTACCAAGACTCAGACACTGACGGTGGGGGGAGTTTAGATGCAGAAAATATGGGTT
ATAGTCTTTACGGCGGTTACCATTTTAACCGTATCGTAGGTATTGAGTTGGGATATACAGACTATGCTGACTATGAAGTG
GTGGGTACTAAGGTTTTTTCTCCTACATCACTTTCTGTTTCTGCAAATGTTGGTTATACATTTGATAATTCTATCCGCCC
GTTCGTGCTAATGGGCATGAGTTACGTTGATCTAAATGCTAGAAATGGTGCTTTAAAAGACGATTCTGATGCTGGGTTCC
ATTTTGGTATTGGTGTTGAATATACTCCAATTGACAACTTAACCCTTCGTTTGATATCTCAAGGTGATGGAATTAGTGTT
GACGAATACTCATCTAATAAAGGCAAGAATACAATCACTAACAGATCTCTTGCCATTAGCACAGTAACATTAGGTGCTTC
ATACAATTTTTAA

Upstream 100 bases:

>100_bases
TAATTTATTATAAACAGTAACGTAACAGGTGGAATAGTGTCGAAAACTATTGGCTGTTAACTAACGTTGCTGTAGGACAG
ACAACAAGAAGGGTATTTGC

Downstream 100 bases:

>100_bases
TGGCTTTTGTTAAGTAGCCTAAAGCTATGGACACCTAAACCGCTCTAACGTTGAGCGGTTTTTTTATGTCAAAAATAACG
ATTGGTCACGCTGTGGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein A

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLKSTYLLGLVGLVSLPTFAAGIEGGPYIGAGLGVYQDSDTDGGGSLDAENMGYSLYGGYHFNRIVGIELGYTDYADYEV
VGTKVFSPTSLSVSANVGYTFDNSIRPFVLMGMSYVDLNARNGALKDDSDAGFHFGIGVEYTPIDNLTLRLISQGDGISV
DEYSSNKGKNTITNRSLAISTVTLGASYNF

Sequences:

>Translated_190_residues
MLKSTYLLGLVGLVSLPTFAAGIEGGPYIGAGLGVYQDSDTDGGGSLDAENMGYSLYGGYHFNRIVGIELGYTDYADYEV
VGTKVFSPTSLSVSANVGYTFDNSIRPFVLMGMSYVDLNARNGALKDDSDAGFHFGIGVEYTPIDNLTLRLISQGDGISV
DEYSSNKGKNTITNRSLAISTVTLGASYNF
>Mature_190_residues
MLKSTYLLGLVGLVSLPTFAAGIEGGPYIGAGLGVYQDSDTDGGGSLDAENMGYSLYGGYHFNRIVGIELGYTDYADYEV
VGTKVFSPTSLSVSANVGYTFDNSIRPFVLMGMSYVDLNARNGALKDDSDAGFHFGIGVEYTPIDNLTLRLISQGDGISV
DEYSSNKGKNTITNRSLAISTVTLGASYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20158; Mature: 20158

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSTYLLGLVGLVSLPTFAAGIEGGPYIGAGLGVYQDSDTDGGGSLDAENMGYSLYGGY
CCCCHHHHHHHHHHHCCHHHHCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCEEEECCE
HFNRIVGIELGYTDYADYEVVGTKVFSPTSLSVSANVGYTFDNSIRPFVLMGMSYVDLNA
EEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCEEECCCCCCEEEECEEEEEEEC
RNGALKDDSDAGFHFGIGVEYTPIDNLTLRLISQGDGISVDEYSSNKGKNTITNRSLAIS
CCCCCCCCCCCCEEEECCEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEE
TVTLGASYNF
EEEECCCCCC
>Mature Secondary Structure
MLKSTYLLGLVGLVSLPTFAAGIEGGPYIGAGLGVYQDSDTDGGGSLDAENMGYSLYGGY
CCCCHHHHHHHHHHHCCHHHHCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCEEEECCE
HFNRIVGIELGYTDYADYEVVGTKVFSPTSLSVSANVGYTFDNSIRPFVLMGMSYVDLNA
EEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCEEECCCCCCEEEECEEEEEEEC
RNGALKDDSDAGFHFGIGVEYTPIDNLTLRLISQGDGISVDEYSSNKGKNTITNRSLAIS
CCCCCCCCCCCCEEEECCEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEE
TVTLGASYNF
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA