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The map label for this gene is yciK [C]

Identifier: 218709611

GI number: 218709611

Start: 1737795

End: 1738535

Strand: Direct

Name: yciK [C]

Synonym: VS_1621

Alternate gene names: 218709611

Gene position: 1737795-1738535 (Clockwise)

Preceding gene: 218709610

Following gene: 218709621

Centisome position: 52.67

GC content: 46.96

Gene sequence:

>741_bases
ATGGTGGAGCAACTCAGAATACACATATTGGTGGTCGGTGGGAGCGGCGGTATTGGTTTCGCTGTGGTTAAACACCTATT
ATCTGAGCTCTCTCGGTTTGATTTTCTTGATGTGCATGTAGACGCGACTTACCACTCTCAACAGCCGGAACTAGAAAACA
ATCGCTTGAGCTGGCACAAAGTCGACGCCACCGACGAAACTGATATCAAGCGCTTGAGTTGCGAGTTTGACCAACTTGAT
TGGTTGATCAACTGCGTGGGTATGCTCCACACTCCAGACCTTGGGCCGGAAAAGAACTTGTCGTCTATCGACCCAGAATT
CTTTCTGAAAAACATCTCGGTAAACACCCTACCTAGCTTGTTACTGGCCAAGCACTTCACGCCAATTCTTAAAGCCAGTG
ACAATCCAAAATTTGCAGTGGTATCGGCCAAAGTCGGCAGTATTTCAGACAACCGATTAGGTGGATGGTATAGCTATCGC
TCATCCAAAGCCGCACTCAACATGTTCATCAAAACCATGTCGATTGAATGGCAACGTACATTGAAGAAAGGCACAGTGTT
AGCGCTACACCCTGGTACAACCGACACGGCTCTATCTAAACCCTTTCAAACCAATGTGCCGCAAGGTAAATTGTTTGAGT
CTAGTTATGTAGCTCACCAGTTGGTCGATATTATTCGCACTGCCACGCCGGATAAAAGTGGGCACTTCTACGCTTACGAT
GGTGAGCAGTTAAAGTGGTAG

Upstream 100 bases:

>100_bases
TGGGTATGCTATATCGCTCTTGGGACAACATGGACGAGCAATCACAACAAGCGATTCTCGATACCGCTGAACAACGAATC
ACAAACTTGGAGAACTTATA

Downstream 100 bases:

>100_bases
TTAATACCAGTGGCCGTCTTTCATGAGTGCTAAAAAAGAAAACCCAACAGAGTTGAAGCTCTATTGGGTTATTTTTTTGA
AAGAGCGCCTTAGTTTTTTA

Product: C factor cell-cell signaling protein

Products: NA

Alternate protein names: C Factor Cell-Cell Signaling Protein; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short Chain Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short-Chain Dehydrogenase/Reductase; C Factor; Cell-Cell Signaling Protein C-Factor; CsgA C-Factor Signaling Protein; Short Chain Dehydrogenase Family Protein; Dehydrogenase; CsgA Rossman Fold Oxidoreductase; Short-Chain Dehydrogenase/Reductase Family Protein; CsgA Protein; Short-Chain Dehydrogenase/Reductase Superfamily Protein; Cell-Cell Signaling Protein CsgA; Oxidoreductase Protein; SDR Family Dehydrogenase/Reductase; Oxidoreductase; Short-Chain Dehydrogenase/Reductase Superfamily; Short-Chain Dehydrogenase/Oxidoreductase; Oxidoreductase Short-Chain Dehydrogenase; C-Factor Protein; Glucose/Ribitol Dehydrogenase; 2-Methylthioadenine Synthetase; NAD Dependent Epimerase/Dehydratase Family; Oxidoreductase Short-Chain Dehydrogenase/Reductase Family; C-Factor; C Factor Cell Signaling Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MVEQLRIHILVVGGSGGIGFAVVKHLLSELSRFDFLDVHVDATYHSQQPELENNRLSWHKVDATDETDIKRLSCEFDQLD
WLINCVGMLHTPDLGPEKNLSSIDPEFFLKNISVNTLPSLLLAKHFTPILKASDNPKFAVVSAKVGSISDNRLGGWYSYR
SSKAALNMFIKTMSIEWQRTLKKGTVLALHPGTTDTALSKPFQTNVPQGKLFESSYVAHQLVDIIRTATPDKSGHFYAYD
GEQLKW

Sequences:

>Translated_246_residues
MVEQLRIHILVVGGSGGIGFAVVKHLLSELSRFDFLDVHVDATYHSQQPELENNRLSWHKVDATDETDIKRLSCEFDQLD
WLINCVGMLHTPDLGPEKNLSSIDPEFFLKNISVNTLPSLLLAKHFTPILKASDNPKFAVVSAKVGSISDNRLGGWYSYR
SSKAALNMFIKTMSIEWQRTLKKGTVLALHPGTTDTALSKPFQTNVPQGKLFESSYVAHQLVDIIRTATPDKSGHFYAYD
GEQLKW
>Mature_246_residues
MVEQLRIHILVVGGSGGIGFAVVKHLLSELSRFDFLDVHVDATYHSQQPELENNRLSWHKVDATDETDIKRLSCEFDQLD
WLINCVGMLHTPDLGPEKNLSSIDPEFFLKNISVNTLPSLLLAKHFTPILKASDNPKFAVVSAKVGSISDNRLGGWYSYR
SSKAALNMFIKTMSIEWQRTLKKGTVLALHPGTTDTALSKPFQTNVPQGKLFESSYVAHQLVDIIRTATPDKSGHFYAYD
GEQLKW

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322779, Length=262, Percent_Identity=25.9541984732824, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6322227, Length=266, Percent_Identity=27.4436090225564, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27571; Mature: 27571

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQLRIHILVVGGSGGIGFAVVKHLLSELSRFDFLDVHVDATYHSQQPELENNRLSWHK
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECEECCCCCCCCCCCCEEEE
VDATDETDIKRLSCEFDQLDWLINCVGMLHTPDLGPEKNLSSIDPEFFLKNISVNTLPSL
ECCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
LLAKHFTPILKASDNPKFAVVSAKVGSISDNRLGGWYSYRSSKAALNMFIKTMSIEWQRT
HHHHHCCHHHCCCCCCCEEEEEEEECCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHH
LKKGTVLALHPGTTDTALSKPFQTNVPQGKLFESSYVAHQLVDIIRTATPDKSGHFYAYD
HHCCCEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
GEQLKW
CCCCCC
>Mature Secondary Structure
MVEQLRIHILVVGGSGGIGFAVVKHLLSELSRFDFLDVHVDATYHSQQPELENNRLSWHK
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECEECCCCCCCCCCCCEEEE
VDATDETDIKRLSCEFDQLDWLINCVGMLHTPDLGPEKNLSSIDPEFFLKNISVNTLPSL
ECCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
LLAKHFTPILKASDNPKFAVVSAKVGSISDNRLGGWYSYRSSKAALNMFIKTMSIEWQRT
HHHHHCCHHHCCCCCCCEEEEEEEECCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHH
LKKGTVLALHPGTTDTALSKPFQTNVPQGKLFESSYVAHQLVDIIRTATPDKSGHFYAYD
HHCCCEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
GEQLKW
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA